Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0397 ATGGGATTGGGTGGCTTGATGCTGTTATGGTTTCAGCTTTACCGTTTTCTTGTTCGGAGGACTGAAAGCGATTTCAATGCCGTCATCCTGAAGCGGCTCTTCATGAGCAAAGTGAATAAACCCCCTCTTTCTCTCTCTAGATTGATTCGCTTCATGAAGGGAAAGGAGGATAAGATTGCTGTAGTTGTTGGAGCTGTGATCGATGACATTTGGGTGTATGAGGTCCCTGCACTGAAGGTAACTGCGCTTAGGTTCACTGAAACTGCCCGGGCTCGGATTGAGAAGGCTGGTGGGGAATGCCTCACATTTGATCAACTGGCTCTCAATGCTCCTCTTGGTCAGAACACGGTTCTTCTTAGAGGTCCCAAGAATGCCCGTGAGGCTGTCAAACACTTTGGACCAGCTCCTGGTGTGCCCCACAGCCACACCAAGCCCTATGTTCGTTCAAAAGGACGAAAATTTGAGCGAGCCAGAGCAAGAAGGAACAGCAGGGGCTTTAGAGTTTGA 507 0.4931 MGLGGLMLLWFQLYRFLVRRTESDFNAVILKRLFMSKVNKPPLSLSRLIRFMKGKEDKIAVVVGAVIDDIWVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALNAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARARRNSRGFRV* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0397 168 Pfam Ribosomal protein 60S L18 and 50S L18e 8 168 IPR021131 -
Dod07g0397 168 PANTHER 60S RIBOSOMAL PROTEIN L18 9 167 IPR000039 GO:0003735|GO:0005840|GO:0006412
Dod07g0397 168 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 9 167 - -
Dod07g0397 168 MobiDBLite consensus disorder prediction 145 168 - -
Dod07g0397 168 Gene3D - 6 168 - -
Dod07g0397 168 SUPERFAMILY Ribosomal proteins L15p and L18e 7 120 IPR036227 -
Dod07g0397 168 MobiDBLite consensus disorder prediction 132 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0397 Dod-Chr7 5258430 5260888 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0397 9 168 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 75.776 2.84e-85 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0397 K02883 - mnt:21394382 248.054