Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0396 ATGTTGCAGGTCGTAGGAACCTTCCTCTCCCCTTCCTCCTCTTCATCTCTGCATCATCTCACACTCGGTTTCAACACCAACACTTGTCCTCCACAACTCTCACACATCACCTATTTCCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACTCGTTACTCCAAAGCTCTCTGCCATGTCAATGTACGCATCAGAAACCGAATCAAACTACGCCCAAAACGGCAAGCTCGTTCTTGCCTCAACCATACTCTTCTTCATACTCCTCCTCTTCTTCATCTTCCTCCGCACCTTCCGCCACACATGCTTCCGCCGCCGCCGTAACAACCACCACCATATCCGCCACCATGCTCCAACCAACTCCACCACCTTTGCTTTCAACAAGGGTCTCCACCCTTCTTTCCTGGCCTCCCTACCCACCTTCACTCACTCCTCTTCCTACGCCACCACTTCTAGCGATAATTGCGCCGTTTGCATGTCGGAGTTTGCTGCCGGCGACGAGGGCCGTGTGCTCCCGAGCTGCCGCCATGTTTTTCATTCTCATTGCATTGATGCGTGGTTCCGCTTTCACTCTAACTGCCCCCTTTGCCGAACCGCGGTTCAACATGGTCCAACCGATGCCCAACCAGCTATAGATGGGTCGGACCACGTTGAATTGGGTTTGGCAAGTTGGTCATCGTTTCCTGGACCGGTTTGGTGCCCGAGGAAGCCTTTGGAGCTAGAAGAGGATAAACTGAGGAAAAGTTACTGTATAAATATCACTCTCACGCCTCATGTGTAG 786 0.5216 MLQVVGTFLSPSSSSSLHHLTLGFNTNTCPPQLSHITYFLSLSLSLSHTHTHTLVTPKLSAMSMYASETESNYAQNGKLVLASTILFFILLLFFIFLRTFRHTCFRRRRNNHHHIRHHAPTNSTTFAFNKGLHPSFLASLPTFTHSSSYATTSSDNCAVCMSEFAAGDEGRVLPSCRHVFHSHCIDAWFRFHSNCPLCRTAVQHGPTDAQPAIDGSDHVELGLASWSSFPGPVWCPRKPLELEEDKLRKSYCINITLTPHV* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0396 261 SUPERFAMILY RING/U-box 151 204 - -
Dod07g0396 261 SMART ring_2 157 198 IPR001841 -
Dod07g0396 261 Pfam Ring finger domain 155 199 IPR001841 -
Dod07g0396 261 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 67 213 - -
Dod07g0396 261 ProSiteProfiles Zinc finger RING-type profile. 157 199 IPR001841 -
Dod07g0396 261 PANTHER RING-H2 FINGER PROTEIN ATL64 67 213 - -
Dod07g0396 261 CDD RING-H2_PA-TM-RING 157 199 - -
Dod07g0396 261 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 134 208 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0396 Dod-Chr7 5254618 5255807 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0396 73 203 Rapid Response to Elicitors AT3G16720 36.552 2.65e-23 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0396 - - ahf:112728565 166.392