Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0394 ATGTCCACCCTCTTCCACAACCTCATCATCATTCTCTTATTCCTCCCCTCCCTAGCTTTCTCAGACACTGCCACCGCTGCCACCACCACCCCGGTGTCCCCAACAACCATATGCAAATCCACACCCGACCCATCTTATTGCAAATCCGTTCTCCCTCCCCGAAACGCCAATGTCTATGACTACGGCCGTTTCTCGGTCAAAAAATCCATATCACAGGCCACAAAATTCTTGAACCTAGTTAACAAGTACCTCCAACGCAGCAACACCCTTTCCATCACCGCAACCCGTGCACTCCAAGATTGCAAGACCCTCGGGGAATTGAACCTTGATTTCCTCACTAGCTCGTTCCAAACCGTGAACAAGAAAACGAGGTTCCTTCCTAGCTTCCAAGCTGATGACATACAAACACTGCTCAGCGCCATCTTGACCAACCAGCAAACGTGCTTGGATGGCCTTCAAGCCACTGCCTCAGCTTGGAGCGTGAAGAACGGACTCAGTGTCCCTCTCTCCAACGACACCAAGCTCTATAGTGTCTCTCTTGCACTATTCACAAAAGGGTGGGTTCCAAACACACCAGATAAAGCTTCTTCCGTTCAACAAACTAGGAAACAACTTGGGTTCCGAAACGGCCGCATGCCACTAAAGATGTCAAGCAGGACACGCGCCATCTACGAGTCAGTGAGCCGCAGGAACCTTCTAGAACCGGTGGTCGACGACGATGTTGTCGTGAAGGACATCGTGACGGTGAGCCAGGACGGTACGGGGAACTTCACCACCATCAACGACGCCATCGCCGCAGCACCGAATAAATCATCCGCTGCGGGAGGGTACTTCCTGATCTATGTTACAGCGGGTGTGTATGATGAAATCGTGTCCATTGATAAGAAGAAGACGTACCTGATGATGGTTGGGGATGGAATCAACAAGACAATCATTACGGGCAACCGCAGTGTTGTTGATGGATGGACAACTTTCAATTCCGCAACCTTTGGTACGTTATAA 1002 0.505 MSTLFHNLIIILLFLPSLAFSDTATAATTTPVSPTTICKSTPDPSYCKSVLPPRNANVYDYGRFSVKKSISQATKFLNLVNKYLQRSNTLSITATRALQDCKTLGELNLDFLTSSFQTVNKKTRFLPSFQADDIQTLLSAILTNQQTCLDGLQATASAWSVKNGLSVPLSNDTKLYSVSLALFTKGWVPNTPDKASSVQQTRKQLGFRNGRMPLKMSSRTRAIYESVSRRNLLEPVVDDDVVVKDIVTVSQDGTGNFTTINDAIAAAPNKSSAAGGYFLIYVTAGVYDEIVSIDKKKTYLMMVGDGINKTIITGNRSVVDGWTTFNSATFGTL* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0394 333 PANTHER PECTINESTERASE 9 330 - -
Dod07g0394 333 Gene3D - 241 332 IPR012334 -
Dod07g0394 333 Pfam Pectinesterase 247 331 IPR000070 GO:0030599|GO:0042545
Dod07g0394 333 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 185 IPR035513 -
Dod07g0394 333 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 185 IPR035513 -
Dod07g0394 333 PANTHER PECTINESTERASE 9 330 - -
Dod07g0394 333 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 184 IPR006501 GO:0004857
Dod07g0394 333 Pfam Plant invertase/pectin methylesterase inhibitor 36 182 IPR006501 GO:0004857
Dod07g0394 333 SMART PMEI_2 29 182 IPR006501 GO:0004857
Dod07g0394 333 SUPERFAMILY Pectin lyase-like 243 330 IPR011050 -
Dod07g0394 333 CDD PMEI-like_3 36 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0394 Dod-Chr7 5243789 5245982 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0394 8 331 Carbohydrate Esterase AT1G02810 54.023 7.99e-117 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0394 K01051 - gmx:100800971 498.819