Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0393 ATGTCCACCCTCCACAACCTTATCATCATTCTCTTATTCCTCCCCTCCCTTGCTTTCTCAGACACTATCACCGCTGCCATCACCACCCCAGTGTCCCCAACAACCATATGCAAATCCACACCCGACCCATCTTATTGCAAATCCGTTCTCCCTCCCCAAAACGCCAATGTCTATGACTATGGCCGTTTCTCGGTCAAAAAATCCATATCACAGGCCACAAAATTCTTGAACCTAGTTAACCAGTACCTCCAACGTAGCAACACACTCTCCATAGCCGCAACCCGTGCACTCCAAGATTGCAAGACCCTCGGGGAACTGAACCTCGATTTCCTCACTAGCTCCTTCCAAACAGTGAACAAGACAACGAGGTTCCTTCCTAGCTTCCAAGCTGATGACATACAAACACTGCTTAGTGCCATCTTGACCAACCAGCAAACATGCTTGGATGGCCTTCAAGCCACTGCCTCAGCTTCGAGCGTCAAGAACGGACTCAGTGTCCCTCTCTCCAACGACACCAAGCTCTACAGTGTCTCTCTTGCACTGTTCACAAAAGGGTGGGTTCCAAACACACCAAACAAAGCTTCTTCCGTTCAACCTACTAGGAAACAACTTGGGTTCCGAAACGGCCGCTTGCCACTGAAGATGTCAAGCAGGACACGCGCCATCTACGAGTCAGTGAGAGGCAGGAACCTTCTCGAACCGGTGGTCGGCGACGAGGTTGTCGTGAAGGACATCGTGACGGTGAGCCAGGACGGTACCGGGAACTTCACCACCATCAACGACGCCATCGCTGCAGCACCGAATAAGTCATCCTCTGCGGAAGGGTACTTCTTGATCTATGTTACAGCGGGTGTGTATGATGAAATCGTGTCCGTTGATAAGAAGAAGACGTACTTGATGATGGTTGGGGATGGAATCAACAAGACAATCATTACGGGCAATCGCAGTGTCGTTGATGGATGGACAACTTTCAATTCCGCAACCTTTGCGGCGGTAGGTGAAGGATTCGTGGGTGTGAACTTCACAATCCGCAACACTGCCGGTGCAGTGAAGCACCAAGCAGTGGCACTTCGAAACGATGCAGATCTGTCCACATTCTACAGCTGCAGCTTCGAAGGGTACCAAGACACACTTTATGCCCACTCCCTAAGACAATTCTATAGGGAATGTGACGTATACGGCACAGTTGATTTCATCTTCGGTAATGCTGCGGCAGTGTTCCAAAATTGCAACTTGTACCCTCGTCTTCCAATGAGTGGACAATTCAATGCAATAACCGCACAAGGAAGAACCGACCCCAACCAAAACACAGGCACATCAATTCACAATTGCACAATTAGAGCAAGTGATGACTTGGCTAGTAACATTGGTGCAGCCTCAACTTACCTAGGGAGGCCTTGGAAAGAGTACTCTAGGACGGTTTACATGCAAAATTACATTGATAGTGTGGTTGACCCTGCAGGTTGGCAAAAGTGGGATGGTGACTTTGCATTGAGCACATTGTATTATGCTGAGTATGGTAATAGTGGACCAGGGTCTAGCACTGACAAAAGGGTCAATTGGGCAGGTTACCATGTGATTAATGCAACCGATGCGGCTAATTTCACGGTCTCTAATTTCTTGCTTGGAGATGATTGGTTGCCAAAGACAGGAGTGACTTATAGTAGTAGCTTGATATAA 1680 0.4851 MSTLHNLIIILLFLPSLAFSDTITAAITTPVSPTTICKSTPDPSYCKSVLPPQNANVYDYGRFSVKKSISQATKFLNLVNQYLQRSNTLSIAATRALQDCKTLGELNLDFLTSSFQTVNKTTRFLPSFQADDIQTLLSAILTNQQTCLDGLQATASASSVKNGLSVPLSNDTKLYSVSLALFTKGWVPNTPNKASSVQPTRKQLGFRNGRLPLKMSSRTRAIYESVRGRNLLEPVVGDEVVVKDIVTVSQDGTGNFTTINDAIAAAPNKSSSAEGYFLIYVTAGVYDEIVSVDKKKTYLMMVGDGINKTIITGNRSVVDGWTTFNSATFAAVGEGFVGVNFTIRNTAGAVKHQAVALRNDADLSTFYSCSFEGYQDTLYAHSLRQFYRECDVYGTVDFIFGNAAAVFQNCNLYPRLPMSGQFNAITAQGRTDPNQNTGTSIHNCTIRASDDLASNIGAASTYLGRPWKEYSRTVYMQNYIDSVVDPAGWQKWDGDFALSTLYYAEYGNSGPGSSTDKRVNWAGYHVINATDAANFTVSNFLLGDDWLPKTGVTYSSSLI* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0393 559 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 183 IPR006501 GO:0004857
Dod07g0393 559 Pfam Plant invertase/pectin methylesterase inhibitor 35 181 IPR006501 GO:0004857
Dod07g0393 559 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 184 IPR035513 -
Dod07g0393 559 CDD PMEI-like_3 35 186 - -
Dod07g0393 559 PANTHER PECTINESTERASE 24 557 - -
Dod07g0393 559 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 184 IPR035513 -
Dod07g0393 559 Pfam Pectinesterase 246 544 IPR000070 GO:0030599|GO:0042545
Dod07g0393 559 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 7-RELATED 24 557 - -
Dod07g0393 559 Gene3D - 240 558 IPR012334 -
Dod07g0393 559 SMART PMEI_2 28 181 IPR006501 GO:0004857
Dod07g0393 559 ProSitePatterns Pectinesterase signature 2. 392 401 IPR033131 -
Dod07g0393 559 SUPERFAMILY Pectin lyase-like 242 556 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0393 Dod-Chr7 5231123 5234586 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0393 7 559 Carbohydrate Esterase AT4G02330 61.471 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0393 K01051 - gmx:100800971 912.909