Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0392 ATGGCTTTCAAGCACTACATTTCCTACCTTCTCCCCTTCTTGCTCTTGACATCTTTGTCCCTAGCAGATGACCATGAAGCCATTTGCCATTCCACAATAGACCCTTCCTATTGCAACAACGTATTTGCCAATCAAAATGGCAACATCTTTGACTATGGCCGCATCTCATTCCAAAAGTCCTTGTCCCAATCCCAAAAGTTCTTGAACCTAGTGAACTCGTATCTTCAAGGTAGCACTAGCAACTCTTTGTCTCAATCCACAATTGGGGCACTCCAAGATTGCCAATTCCTTGCTGAACAAAACATAGAGTACTTGTCAAACACCTACTCCACAATCAACCAAGCTAGTAGCCTTCTCCCCATTTCGCAAGCTGAAGACTCCCAAACCATTCTAAGTGCAGTTTTGACAAACCAACAAACTTGTCTTGATGGGTTGCAAACCTCAGCTTCTGACCAAAGTGTGAAGGATGACCTTTCCTCTTCACTCTCTAATGACACAAAGCTTCATAGTTTGTCCCTAGCTTTGTTCACAAAAGGGTGGGTCCCTAGCAAGAAAATCATCACATCATGGCCACGCAATAAGCACAACTTTGATTTCAAACATGGTCAATTGCCATTGAAGATGTCAAAGAAAGTGCAAGACATTTATGACCACGCTAGGCACCATGGTAGGAAATTGCTTCAAACGGTGAATGATGGCAATGATCAAAGTGTTGTGGTGCGTGACATTGTGGTTGTGAGCCAGGATGGGAGTGGGAACTTCACCAACATCAATGATGCCATAGCTGCTGCACCTAATAACACAGCTGCTAGTGATGGCTACTTCTTTATATTTGTCAGACAAGGTGTGTATCAAGAGTATGTGTCCATAAACAAGACCAAGAAGTACCTGATGTTGGTTGGAGAAGGAATTAACCAGACGATTATCACTGGAGATCACAATGTTGCGGATGGTTTCACAACATTCAATTCAGCAACATTTGTCATGCATTTGATTATTCTATTCGATCAAGCGGGGGCCTCTTGTCACTATGGTGTAAAGATTGTCATTGAGCAAATTGATTATTGA 1068 0.4251 MAFKHYISYLLPFLLLTSLSLADDHEAICHSTIDPSYCNNVFANQNGNIFDYGRISFQKSLSQSQKFLNLVNSYLQGSTSNSLSQSTIGALQDCQFLAEQNIEYLSNTYSTINQASSLLPISQAEDSQTILSAVLTNQQTCLDGLQTSASDQSVKDDLSSSLSNDTKLHSLSLALFTKGWVPSKKIITSWPRNKHNFDFKHGQLPLKMSKKVQDIYDHARHHGRKLLQTVNDGNDQSVVVRDIVVVSQDGSGNFTNINDAIAAAPNNTAASDGYFFIFVRQGVYQEYVSINKTKKYLMLVGEGINQTIITGDHNVADGFTTFNSATFVMHLIILFDQAGASCHYGVKIVIEQIDY* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0392 355 SMART PMEI_2 20 175 IPR006501 GO:0004857
Dod07g0392 355 Pfam Plant invertase/pectin methylesterase inhibitor 26 175 IPR006501 GO:0004857
Dod07g0392 355 SUPERFAMILY Pectin lyase-like 239 329 IPR011050 -
Dod07g0392 355 Pfam Pectinesterase 244 329 IPR000070 GO:0030599|GO:0042545
Dod07g0392 355 Gene3D - 238 333 IPR012334 -
Dod07g0392 355 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 178 IPR035513 -
Dod07g0392 355 PANTHER PECTINESTERASE 18 328 - -
Dod07g0392 355 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 18 328 - -
Dod07g0392 355 CDD PMEI-like_3 27 180 - -
Dod07g0392 355 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 178 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0392 Dod-Chr7 5217207 5219838 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0392 7 348 Carbohydrate Esterase AT1G02810 44.444 5.18e-93 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0392 K01051 - gmx:100813051 397.512