Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0391 ATGAACAACCTCAGAACAGCACCCTTTCTGGCCCTTATACCCATTCTGTCCATTGTTTTTGCACTACTCTTTTTGGGAACCAATTTCACTAGTGAAACCCCAAAACTCAAAACAACACCCCAAGAAGAAAAACACCTCCATTTCCAAAAACACATTCAAGTTGCACATTCCACATGTCAAGGGACACTCTACACTGACCTATGTGTCTCAACCTTGGCCTCATTCCCAGATCTTGCAACAAAATCAGTGCCACAAATCATCTCCTCGGTTGTAAACCACACAGTCTATGAGGTCAAATCCTCATCCTACAACTGCAGCAGCCTAAGAAAGAAGCTCCAAAACATTCTCAACCCTCTTGAGAAAAGAGCTCTAGATGACTGCCTCAAGCTCTTTGATGACACCACAGTGGAGCTCAAAGCCACCATTGATGATCTTTCCAAAACAACAATAGCGTCCAATAAGAGGCACCATGACTTGCAAACAATGCTAAGTGGGGCAATGACCAATTTGTACACTTGCCTTGATGGTTTTGCACACAGCAGTGATGGGAATGTGAGGGGCATAATACAGGATAATCTGCTTGAGATTTCACACCATGTTAGCAATTCCTTGGCAATGCTGAACAAAGTTCCTGGAGTGAAGAAAAGTTCCAAGTTTGGTGGTGAAGTGTTCCCTGAATATGGGAAGATGAAAAAGGGGTTCCCTTCTTGGGTCTCCTCCAAAGATAGAAAGCTCCTGCAAGGTGCTGTGAATGAGACCAAGTTCGATCTTGTGGTGGCCAAAGATGGCACCGGCAATTTCACCACTATAGGGGAAGCTGTGGATGTGGCTCCCAACTCCAGCACAACAAGGTTTGTGATATACATTAAGGCTGGAGCATACTTCGAGAATGTGGAAGTGATCAGGAAGAAGACCAAGGTGATGTTTATTGGAGATGGGATTGGAAAAACTGTAGTAAAAGCAAGTAGGAATGTTGTGGACAAGTGGACCACTTTTCAATCAGCTACTGTTGCTGTGGTAGGAGAAGGCTTCATAGCAAAGGGCATAACCTTTGAGAACTCAGCAGGGCCAGAGAAACACCAAGCAGTGGCACTAAGGAGTGGTGCTGACTTCTCAGCCTTCTACCAATGCAGCTTTGTTGGCTACCAAGACACACTTTATGTCCACTCCATGCGCCAATTCTACCGTGAGTGTGACATTTATGGCACTGTTGACTTCATATTTGGCAATGCAGCAGTTGTGTTCCAAAACTGCAACTTATATGCAAGAAAGCCAAACGAGAACCAAAAGAACTTGTTCACTGCACAAGGCAGAGAGGACCCTAACCAAAACACTGGAATATCAATCTTGAATTGCAAGATTGCAGCTGCTTCAGACTTAGTGCCATTCAAATCATCATTCAAGAGCTACCTAGGAAGGCCTTGGAAATTGTATTCAAGGACAGTTTACCTAAGATCTTACATGGAGGATCTGATTGACCCTAAAGGGTGGTTGGAATGGAATGAAACTTTTGCATTGGACACACTTTATTATGGGGAGTACATGAATAAGGGACCCGGTTCTAACACAAGTGGCAGGGTCAATTGGCAAGGTTATAGGGTCATTAATAGTTCCACTGAGGCAAGCCAATTCACTGTAGGGCAGTTTATACAAGGGAATGAGTGGTTGAATAACACAGGCATTCCATTCTTCTACAATTTGAGTTGA 1707 0.4394 MNNLRTAPFLALIPILSIVFALLFLGTNFTSETPKLKTTPQEEKHLHFQKHIQVAHSTCQGTLYTDLCVSTLASFPDLATKSVPQIISSVVNHTVYEVKSSSYNCSSLRKKLQNILNPLEKRALDDCLKLFDDTTVELKATIDDLSKTTIASNKRHHDLQTMLSGAMTNLYTCLDGFAHSSDGNVRGIIQDNLLEISHHVSNSLAMLNKVPGVKKSSKFGGEVFPEYGKMKKGFPSWVSSKDRKLLQGAVNETKFDLVVAKDGTGNFTTIGEAVDVAPNSSTTRFVIYIKAGAYFENVEVIRKKTKVMFIGDGIGKTVVKASRNVVDKWTTFQSATVAVVGEGFIAKGITFENSAGPEKHQAVALRSGADFSAFYQCSFVGYQDTLYVHSMRQFYRECDIYGTVDFIFGNAAVVFQNCNLYARKPNENQKNLFTAQGREDPNQNTGISILNCKIAAASDLVPFKSSFKSYLGRPWKLYSRTVYLRSYMEDLIDPKGWLEWNETFALDTLYYGEYMNKGPGSNTSGRVNWQGYRVINSSTEASQFTVGQFIQGNEWLNNTGIPFFYNLS* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0391 568 CDD PMEI-like_3 57 212 - -
Dod07g0391 568 ProSitePatterns Pectinesterase signature 2. 400 409 IPR033131 -
Dod07g0391 568 TIGRFAM PME_inhib: pectinesterase inhibitor domain 19 209 IPR006501 GO:0004857
Dod07g0391 568 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 212 IPR035513 -
Dod07g0391 568 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 56 211 IPR035513 -
Dod07g0391 568 SMART PMEI_2 50 206 IPR006501 GO:0004857
Dod07g0391 568 Gene3D - 250 567 IPR012334 -
Dod07g0391 568 PANTHER PECTINESTERASE 37 567 - -
Dod07g0391 568 SUPERFAMILY Pectin lyase-like 254 565 IPR011050 -
Dod07g0391 568 Pfam Pectinesterase 256 553 IPR000070 GO:0030599|GO:0042545
Dod07g0391 568 Pfam Plant invertase/pectin methylesterase inhibitor 56 206 IPR006501 GO:0004857
Dod07g0391 568 PANTHER PECTINESTERASE 37 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0391 Dod-Chr7 5203194 5210170 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0391 79 567 Carbohydrate Esterase AT4G02320 55.400 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0391 K01051 - gmx:100802881 933.71