Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0373 ATGCGAGCGGCACTCTCACACTATTCACTCCGTCTCCGTCTAGCTTCCTCACTCTTCACCAAACCAAACACTTCTCACCTCTTCACTACCACCACACCCTCCCCACCACCACCACCACAACAACAACCCTCTAACCCGATCCGACTCGATCCACCTCCCATCAGGGTCGGACTCACCGACTCGGCGGGTCGCGGCGTCTTCGCCACCCGCCCGATCGCCGCCGGAGAACTCATCCACACTGCGAAACCCGCCCTCTGCCACCCTTCTCCATCAGCTCTCCACAGTGTCTGTTACCACTGCCTCCGGAGAATCACGAGTCCTAACGACTCCCACCCTCGGCGCGTGTCGTTTTGCAGCCACGACTGTGAGCGACACTGCAAGGATTATTATGATGTTGAAATGAAAGCAAATTGGATGGCTTTTGATGAATATTGCCGGACACGCGGTTTGAAATATCCCTTTCTGGTAAGGCGGTTGGCTTGCATGGTCATATCAGGAGTTGCCAGAAGTGATAGTCTTGACATACTTCAGCCTGCCAATTTGACCCCTGAGATGATTTTACAGATGGAAGAAGGGTTTGCCTTGCTAAGGAATGCTTTGACAGAGACACTTATTGCAGATGAACAAATTGCTTTTTTAACCAAGCAATGGTATATTAGCGTTTTGGCACGAATTCGAATCAATGCATTTCGCATTGATTTGGCTGGAGGACTATATGAAGATCTTCTTTCATCTGCAGCTGCATCGGTAGAAGCTGAAGCTTCTGTCGGAAATGCTGTCTATATACTTCCATCCTTCTACAATCATGATTGCGATCCAAATACTCACATTATATGGATAGATAATGCAGATGCAAAATTGAAGGCCCTCTGCGATGTTGATGAAGGTGAAGAACTCAGAATCTGCTATATTGATGCCAGCCTGGGCCGTGATGCTCGGCAAGAACTATTGTCTCGGGGTTTTGGTTTTCAATGCAATTGTAGCAGGTGCTTACATGGCAATTAA 1005 0.4856 MRAALSHYSLRLRLASSLFTKPNTSHLFTTTTPSPPPPPQQQPSNPIRLDPPPIRVGLTDSAGRGVFATRPIAAGELIHTAKPALCHPSPSALHSVCYHCLRRITSPNDSHPRRVSFCSHDCERHCKDYYDVEMKANWMAFDEYCRTRGLKYPFLVRRLACMVISGVARSDSLDILQPANLTPEMILQMEEGFALLRNALTETLIADEQIAFLTKQWYISVLARIRINAFRIDLAGGLYEDLLSSAAASVEAEASVGNAVYILPSFYNHDCDPNTHIIWIDNADAKLKALCDVDEGEELRICYIDASLGRDARQELLSRGFGFQCNCSRCLHGN* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0373 334 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 59 331 - -
Dod07g0373 334 ProSiteProfiles SET domain profile. 52 304 IPR001214 GO:0005515
Dod07g0373 334 SMART set_7 52 310 IPR001214 GO:0005515
Dod07g0373 334 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD3 59 331 - -
Dod07g0373 334 Gene3D SET domain 65 330 IPR046341 -
Dod07g0373 334 SUPERFAMILY SET domain 51 328 IPR046341 -
Dod07g0373 334 CDD SET_SMYD 257 330 - -
Dod07g0373 334 MobiDBLite consensus disorder prediction 23 52 - -
Dod07g0373 334 Gene3D - 96 143 - -
Dod07g0373 334 MobiDBLite consensus disorder prediction 31 50 - -
Dod07g0373 334 Gene3D - 144 229 - -
Dod07g0373 334 Pfam SET domain 63 303 IPR001214 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dod07g0373 SET 2.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0373 - - adu:107475991 498.819