Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0369 ATGTTCTACGACGAAGCTATGTCTGCTTATGGTTTCAATTTCAGTTTGGATATTCAATTTCGGTTTCTGTGCGCTGTGAAATTCAACATGAGGGGAAGAAGCTACAGCTACAGTCCCTCTCCTCCTCCAAGGCGTTACAGCCGAAGAAGGCGAAGCCCGAGCCCCAGGGGCCGCTATGGAGGCCGTGGTAGGGATTTGCCAACAAGCCTTCTGGTTCGAAACCTTCACAGAGATTGCAGGCCTGAAGATCTACGTGGTCCATTTGGTCACTTTGGTCCTCTCAAGGATGTTTACCTGCCTCGGGATTATTATTCTGGGGAGCCACGTGGTTTTGGGTTTGTTCAATATGTGGATCCAGCTGATGCAGCAGATGCAAAATATCATATGGATGGTCAAATTCTACTTGGTCGGGAGTTAACAGTGGTGTTTGCTGAGGAAAACAGAAAGAAACCTGCAGAAATGAGGGCTAGAGAGCGACGAAGGTCACATGATTATAGGAGATCTCCTTATCGATATTCTCGTTCACCACGCTATGCTCGAACTTATTCACGGAGTCCGGACTATTCACCTTCCCCAAGACGAAGACATTATTACAGGTCAATGTCACCTAGAGACAGAAGGTATAGGGGTCGATCATACTCCCGATCTCCTTATGGATCAAGAAGCCGAAGTCGAAGCAGGAGCTACAGCAGAAGTTACAGCAGGAGCTACAGTAGAAGCCCAGGCTACTCCAGGTGA 738 0.481 MFYDEAMSAYGFNFSLDIQFRFLCAVKFNMRGRSYSYSPSPPPRRYSRRRRSPSPRGRYGGRGRDLPTSLLVRNLHRDCRPEDLRGPFGHFGPLKDVYLPRDYYSGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPAEMRARERRRSHDYRRSPYRYSRSPRYARTYSRSPDYSPSPRRRHYYRSMSPRDRRYRGRSYSRSPYGSRSRSRSRSYSRSYSRSYSRSPGYSR* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0369 245 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 70 139 IPR000504 GO:0003723
Dod07g0369 245 Gene3D - 63 184 IPR012677 -
Dod07g0369 245 SUPERFAMILY RNA-binding domain, RBD 68 174 IPR035979 GO:0003676
Dod07g0369 245 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 30 231 - -
Dod07g0369 245 PANTHER SERINE/ARGININE-RICH SC35-LIKE SPLICING FACTOR SCL30A 30 231 - -
Dod07g0369 245 SMART rrm1_1 69 142 IPR000504 GO:0003723
Dod07g0369 245 MobiDBLite consensus disorder prediction 35 66 - -
Dod07g0369 245 MobiDBLite consensus disorder prediction 149 171 - -
Dod07g0369 245 MobiDBLite consensus disorder prediction 215 245 - -
Dod07g0369 245 MobiDBLite consensus disorder prediction 149 245 - -
Dod07g0369 245 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 68 146 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0369 Dod-Chr7 4927975 4930079 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0369 68 157 Eukaryotic Initiation Factors Gene Family AT4G34110 30.000 1.94e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0369 K12900 - rcu:8258405 192.971