Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0349 ATGGGAAACAACTGCGTCGGACCGAATCTCGGCGGCAACGGCTTCCTGCAATCCGTCACGGCAGCGGTGTGGAAGACTCGTCCGCCGGAGGCCAGGCTCCCGCCACCAAACTCCGCCGCTGGAGACAACAGTAACAACAGCAGCACCAATAATAAAAGCAATAACAACAGCAACGATAACAACAAGCAGAATCCTCCACAACAGTCTCCGTCGCCGGCGAATCCCGCCACATCACCCTCCAACCGGCCGAGCACCGCCGCATCAACAGCATCCGGCGGCGCCGGCAAAGACTCCGACGCCTCCCGTCCAATGCCGGTTCAGAGCACTCCCCCTGAAACGGTTAAAATAACCGCCTCGGAAACAAAGCCGGTACAACCAGTACAACCGGTTAAACCGGTGGTGGTGAATAATGAACCACCACCTAACACTGGTGGTGTTAATGTTAATAATGTCAATGTTAACGTTAATGTTGGTGATAGTGGTGGTGGTGATGCAGGGAAAGCTAAGAAACCCACTCATGTGAAGAGGGTTTCAAGCGTTGGCCTTCAAGTGGAATCGGTATTGGGTAGGAAAACCGGGAACCTGAAGGAACGGTTTAGCTTGGGTAGGAAGCTAGGGCAAGGTCAATTTGGGACAACATTCCTCTGTTTGGAAAAGGGAACAAACAAGGAATTTGCATGCAAGTCAATTTCAAAGAGGAAATTGACCACACAAGAGGATGTTGAGGATGTTAGGAGGGAGATTAGGATCATGCACCACTTGGCTGGCCACGAAAATGTGATTTCCATTGTTGATGCTTATGAGGATGCTGTGGCTGTTCATGTTGTTATGGGGCTTTGTGCTGGTGGGGAGTTGTTTGATAGGATCATACAGAGAGGGCATTACACTGAGAGGAAAGCTGCTGAGCTTGCTAGGGTGATTGTTGGTGTTGTTGAGGCTTGCCATTCTTTGGGTGTCATGCATAGGGACTTGAAGCCGGAGAATTTCCTCTTTGTCAACCATGAAGAGGAATCGGCCCTCAAAACTATTGATTTCGGGCTCTCAGTGTTCTTTAGACCAGGTGAAACGTTTACTGATGTGGTTGGGAGCCCATACTATGTGGCCCCTGAAGTTTTGCGGAAGCACTATGGACCAGAATGTGATGTTTGGAGTGCTGGGGTGATCATTTATATTTTACTGAGTGGCGTCCCTCCATTTTGGGATGAAACGGAACAAGGAATATTTGAGCAAGTTTTGAAAGGAGAGCTTGACTTTGTTTCTGAACCATGGCCTAACATATCTGAAGGTGCAAAGGATCTTGTTCGACGAATGCTTATAAGGGACCCTAAGAAGCGGTTGACAGCACATGAAGTTCTTTGCCACCCCTGGGTTCAGGAAGGAGGTCTTGCTCCAGATAAACCACTTGATTCTGCTGTTTTATCTCGTCTGAAGCAATTCTCTGCAATGAACAAGCTTAAAAAAATTGCCATTCGAGTAATTGCTGAAAGTCTGTCTGAGGAGGAAATTGCAGGACTGAAAGAAATGTTCAAGATGATAGACACAGATGGTAGCGGACAGATCACTCTTGAGGAACTGAAAAATGGTTTGGAAAGAGTGGGTGCTGATCTTAAGGATTCTGAAATCCATTGGTTAATGGAAGCCGCAGACGTTGATAATAGTGGTACCATAGACTATGGTGAATTCATAGCAGCTATGCTTCATCTAAACAAGGTCCAGAAGGAGGATCATCTATATGCTGCCTTCTCCTACTTTGACCAAGATGGAAGTGGATATATTACACGGGATGAGCTTCAACTAGCCTGTGAAAAGTTTGGCATGGTAGATGTTCACCTAGATGATATAATACGTGAAGTTGACCAGGATAACGATGGACTCATTGATTACAATGAGTTTGCTGCAATGATGCAAGACACGAATTTTGGGAAAATGGGGTTACAATTAACATGA 1947 0.4669 MGNNCVGPNLGGNGFLQSVTAAVWKTRPPEARLPPPNSAAGDNSNNSSTNNKSNNNSNDNNKQNPPQQSPSPANPATSPSNRPSTAASTASGGAGKDSDASRPMPVQSTPPETVKITASETKPVQPVQPVKPVVVNNEPPPNTGGVNVNNVNVNVNVGDSGGGDAGKAKKPTHVKRVSSVGLQVESVLGRKTGNLKERFSLGRKLGQGQFGTTFLCLEKGTNKEFACKSISKRKLTTQEDVEDVRREIRIMHHLAGHENVISIVDAYEDAVAVHVVMGLCAGGELFDRIIQRGHYTERKAAELARVIVGVVEACHSLGVMHRDLKPENFLFVNHEEESALKTIDFGLSVFFRPGETFTDVVGSPYYVAPEVLRKHYGPECDVWSAGVIIYILLSGVPPFWDETEQGIFEQVLKGELDFVSEPWPNISEGAKDLVRRMLIRDPKKRLTAHEVLCHPWVQEGGLAPDKPLDSAVLSRLKQFSAMNKLKKIAIRVIAESLSEEEIAGLKEMFKMIDTDGSGQITLEELKNGLERVGADLKDSEIHWLMEAADVDNSGTIDYGEFIAAMLHLNKVQKEDHLYAAFSYFDQDGSGYITRDELQLACEKFGMVDVHLDDIIREVDQDNDGLIDYNEFAAMMQDTNFGKMGLQLT* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0349 648 MobiDBLite consensus disorder prediction 21 124 - -
Dod07g0349 648 MobiDBLite consensus disorder prediction 102 124 - -
Dod07g0349 648 Gene3D Transferase(Phosphotransferase) domain 1 285 463 - -
Dod07g0349 648 ProSitePatterns EF-hand calcium-binding domain. 549 561 IPR018247 -
Dod07g0349 648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 319 331 IPR008271 GO:0004672|GO:0006468
Dod07g0349 648 Gene3D - 464 640 - -
Dod07g0349 648 CDD STKc_CAMK 198 456 - -
Dod07g0349 648 ProSiteProfiles EF-hand calcium-binding domain profile. 500 535 IPR002048 GO:0005509
Dod07g0349 648 ProSitePatterns Protein kinases ATP-binding region signature. 205 228 IPR017441 GO:0005524
Dod07g0349 648 Gene3D Phosphorylase Kinase; domain 1 201 284 - -
Dod07g0349 648 Pfam EF-hand domain pair 575 636 IPR002048 GO:0005509
Dod07g0349 648 Pfam EF-hand domain pair 505 565 IPR002048 GO:0005509
Dod07g0349 648 ProSitePatterns EF-hand calcium-binding domain. 585 597 IPR018247 -
Dod07g0349 648 ProSiteProfiles Protein kinase domain profile. 199 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0349 648 ProSiteProfiles EF-hand calcium-binding domain profile. 610 641 IPR002048 GO:0005509
Dod07g0349 648 SMART efh_1 576 604 IPR002048 GO:0005509
Dod07g0349 648 SMART efh_1 504 532 IPR002048 GO:0005509
Dod07g0349 648 SMART efh_1 540 568 IPR002048 GO:0005509
Dod07g0349 648 SMART efh_1 610 638 IPR002048 GO:0005509
Dod07g0349 648 Pfam Protein kinase domain 200 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0349 648 MobiDBLite consensus disorder prediction 78 95 - -
Dod07g0349 648 SUPERFAMILY Protein kinase-like (PK-like) 197 466 IPR011009 -
Dod07g0349 648 ProSiteProfiles EF-hand calcium-binding domain profile. 536 571 IPR002048 GO:0005509
Dod07g0349 648 ProSitePatterns EF-hand calcium-binding domain. 619 631 IPR018247 -
Dod07g0349 648 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 128 640 - -
Dod07g0349 648 SMART serkin_6 199 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0349 648 ProSitePatterns EF-hand calcium-binding domain. 513 525 IPR018247 -
Dod07g0349 648 ProSiteProfiles EF-hand calcium-binding domain profile. 572 607 IPR002048 GO:0005509
Dod07g0349 648 CDD EFh 579 636 IPR002048 GO:0005509
Dod07g0349 648 PANTHER SERINE/THREONINE-PROTEIN KINASE 128 640 - -
Dod07g0349 648 CDD EFh 505 565 IPR002048 GO:0005509
Dod07g0349 648 SUPERFAMILY EF-hand 497 636 IPR011992 -
Dod07g0349 648 MobiDBLite consensus disorder prediction 38 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0349 Dod-Chr7 4231733 4238469 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0349 1 648 EF-hand Containing Proteins AT2G38910 68.364 0.0 884
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dod07g0349 Pkinase 1.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0349 K13412 - gmx:100813232 918.302
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0349 07 4231733 4238469 Dod07g0349 07 4231733 4238469 ECH