Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0340 ATGGGAAACAACTGTGTTGGATCAAGAACTAGCTCTTCCATAGATGGTTCATCATCAAAATCATTCTGGTGGTCAAGGCCTACCAAGAAAGCAGGTTCTCATGCTCACAAAGGTGAACTTGCAAGCAAAAGACAGAATGATACAGAATCTGTTCAGCAAAAGGCTCCACAGGTAATGAAATTTGACAAGGAGGAGGTGAAGCCAGCTCAATCCAAAGAGACCAATACTAAGCCTTCAGAACCAGTAAAGCATGAGGAGAAGACCATATTGCCCTCACCACCACCACCAACACCAACCCCAACACCAACACCAACAACAACAACAACAAATAAGCAAAAGAAAGAAAGGGCTGGAGCAGGAGAGCCTGCAAAACCAAAGAGACCCCACAATGTTAAGAGGCTAGCAAGTGCTGGCCTCGAGACAGATTCAGTTTTGTTAAGAAGAACTAGTAATCTTAGGGAGTGCTATAATTTGGGACCAAAGCTTGGACAAGGGCAATATGGAACGACTTTCCTTTGCATTGAGAAAACCACTGGGAAGGAGTATGCATGCAAGTCCATTGTGAAGAGGAAGTTGCTGACTGAGGAAGATGTGGAGGATGTGAGGAGGGAGATTCAGATAATGCATCACTTGGCAGGGAGCCCCAATGTGATATCCATTAAAGAGGCTTATGAGGATGCTGTTGCTGTTCATGTTGTGATGGAGTTGTGTGCAGGGGGTGAGCTGTTTGACAGGATTGTGGAAAGAGGGCATTACACTGAAAGAAAGGCTGCTAAGCTTGCAAGGACTATTGTTGGTGTTATAGAATCTTGCCACTCCCTTGGAGTATTGCACCGTGACCTTAAGCCGGAGAATTTTCTCTTTGTCAATGAGCAGGAAGAATCACCCCTTAAGGCAATAGATTTTGGGCTTTCTGCTTTCTTCAAACCAGGAGACATTTTCAATGATGTGGTAGGAAGCCCCTACTATGTTGCACCTGAAGTTCTACGCAAGCATTATGGCCCAGAAGCAGATGTGTGGAGTGCTGGTGTTATCCTGTACATTCTGTTATGTGGGGTGCCTCCATTTTGGGGTGAAACGGAGCAAGAGATTTTTGATGTGATTTTGAAAGGTGATCTCGATTTCTCATCGGATCCCTGGCCTAGTATTTCTGAAAGTGCAAAAGACTTGGTTAGGAAGATGCTTGCCAGAGATCCTAGTAAACGGATAACAGCTTATCAAGTTCTTCGACACCCCTGGATTCAAGTTGATGGATCAGCTCCAGACAAGCCTCTTGATTCAGCAGTTTTGACTCATCTGAAGCAGTTTTCTGCAATGAACAAGCTCAAGAAAATGGCTCTTAGAGTTATTGCAGAGAATCTCTCTGAAGAAGAAATTGCTGGGTTAAAAGAAATGTTTAAGATGATAGATACAGATAACAGTGGTCAAATTACTTTTGAAGAACTCAAGGTTGGACTGAAAAGATTTGGTGCCAATCTGAATGAGTCTGAAATTTATGACCTAATGCAAGCTGCAGATGTTGATAACAGTGGTACAATTGACTATGGAGAATTCATAGCTGCAACGCTGCATTTGAACAAAATTGAACGGGAAGATCATTTAGTTGCAGCTTTCTCATACTTCGACAAAGATGGTAGCGGCTACATCACTCCAGATGAGCTTCAACAAGCCTGTGAAGAATTCGGAATAGAGGATGTCCACTTGGAGGAAATGATCAGAGAAATAGATCAGGATAATGATGGACGAATAGACTACAATGAATTTGTTGCTATGATGCAGAGAGGCAATGCAAATTTGGGTAGGAGAGGCCGAAAGGGTAGCAGAAGTTTTAGAATTGGATTTAGGGAAGCACTACCTGTATATTAA 1866 0.4298 MGNNCVGSRTSSSIDGSSSKSFWWSRPTKKAGSHAHKGELASKRQNDTESVQQKAPQVMKFDKEEVKPAQSKETNTKPSEPVKHEEKTILPSPPPPTPTPTPTPTTTTTNKQKKERAGAGEPAKPKRPHNVKRLASAGLETDSVLLRRTSNLRECYNLGPKLGQGQYGTTFLCIEKTTGKEYACKSIVKRKLLTEEDVEDVRREIQIMHHLAGSPNVISIKEAYEDAVAVHVVMELCAGGELFDRIVERGHYTERKAAKLARTIVGVIESCHSLGVLHRDLKPENFLFVNEQEESPLKAIDFGLSAFFKPGDIFNDVVGSPYYVAPEVLRKHYGPEADVWSAGVILYILLCGVPPFWGETEQEIFDVILKGDLDFSSDPWPSISESAKDLVRKMLARDPSKRITAYQVLRHPWIQVDGSAPDKPLDSAVLTHLKQFSAMNKLKKMALRVIAENLSEEEIAGLKEMFKMIDTDNSGQITFEELKVGLKRFGANLNESEIYDLMQAADVDNSGTIDYGEFIAATLHLNKIEREDHLVAAFSYFDKDGSGYITPDELQQACEEFGIEDVHLEEMIREIDQDNDGRIDYNEFVAMMQRGNANLGRRGRKGSRSFRIGFREALPVY* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0340 621 CDD EFh 533 593 IPR002048 GO:0005509
Dod07g0340 621 SUPERFAMILY EF-hand 453 594 IPR011992 -
Dod07g0340 621 MobiDBLite consensus disorder prediction 58 87 - -
Dod07g0340 621 Gene3D Phosphorylase Kinase; domain 1 159 241 - -
Dod07g0340 621 ProSiteProfiles EF-hand calcium-binding domain profile. 493 528 IPR002048 GO:0005509
Dod07g0340 621 SMART serkin_6 156 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0340 621 ProSiteProfiles EF-hand calcium-binding domain profile. 457 492 IPR002048 GO:0005509
Dod07g0340 621 ProSiteProfiles EF-hand calcium-binding domain profile. 567 598 IPR002048 GO:0005509
Dod07g0340 621 Pfam EF-hand domain pair 462 522 IPR002048 GO:0005509
Dod07g0340 621 Pfam EF-hand domain pair 533 593 IPR002048 GO:0005509
Dod07g0340 621 Gene3D - 439 598 - -
Dod07g0340 621 SUPERFAMILY Protein kinase-like (PK-like) 154 415 IPR011009 -
Dod07g0340 621 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 92 603 - -
Dod07g0340 621 Pfam Protein kinase domain 156 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0340 621 SMART efh_1 567 595 IPR002048 GO:0005509
Dod07g0340 621 SMART efh_1 533 561 IPR002048 GO:0005509
Dod07g0340 621 SMART efh_1 461 489 IPR002048 GO:0005509
Dod07g0340 621 SMART efh_1 497 525 IPR002048 GO:0005509
Dod07g0340 621 ProSitePatterns EF-hand calcium-binding domain. 576 588 IPR018247 -
Dod07g0340 621 ProSitePatterns Protein kinases ATP-binding region signature. 162 189 IPR017441 GO:0005524
Dod07g0340 621 ProSiteProfiles EF-hand calcium-binding domain profile. 529 564 IPR002048 GO:0005509
Dod07g0340 621 ProSitePatterns EF-hand calcium-binding domain. 542 554 IPR018247 -
Dod07g0340 621 Gene3D Transferase(Phosphotransferase) domain 1 242 438 - -
Dod07g0340 621 CDD STKc_CAMK 156 413 - -
Dod07g0340 621 MobiDBLite consensus disorder prediction 1 26 - -
Dod07g0340 621 MobiDBLite consensus disorder prediction 114 128 - -
Dod07g0340 621 CDD EFh 462 521 IPR002048 GO:0005509
Dod07g0340 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Dod07g0340 621 ProSitePatterns EF-hand calcium-binding domain. 506 518 IPR018247 -
Dod07g0340 621 MobiDBLite consensus disorder prediction 1 134 - -
Dod07g0340 621 ProSitePatterns EF-hand calcium-binding domain. 470 482 IPR018247 -
Dod07g0340 621 ProSiteProfiles Protein kinase domain profile. 156 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0340 621 MobiDBLite consensus disorder prediction 88 103 - -
Dod07g0340 621 PANTHER SERINE/THREONINE-PROTEIN KINASE 92 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0340 Dod-Chr7 4133487 4137525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0340 1 615 EF-hand Containing Proteins AT5G04870 68.320 0.0 841
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dod07g0340 Pkinase 4.6e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0340 K13412 - gmx:100800415 953.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0340 07 4133487 4137525 Dod01g2982 01 70457585 70460704 PCT