Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0328 ATGAGCAACACAACTGATTCTTCTGGATTGCTTGGCTCCAATGACATAAGTGGATTTGGCTATGGAATTGGAATCGCAATTGGGATTCTGTTGCTCATCACAACCATCACCCTCACCTCATACTTCTGCACAAGGACACAAGTTCCTAGTGCTCCTCCAGCTACTCATAGAAGAAGGGCCAGCCCAATTTTCCTTCAACCAGAAAACTCAGTTGTTGTCGATGTGGGGCTAGATGAGGCCACAATTCTTGGTTATCCGAAGATGCTTTACTCAGAAGCCAAGCTTAGAAAATCTGATTCCATAGCAACATGTTGCTCCATATGCCTGGGTGATTACAAAGGTAGTGATATGTTAAGGGTGTTGCCTGATTGTGAGCATGTGTTCCATCTCAAGTGCATAGATCCATGGTTGAGGCTGCATCCTACTTGTCCTCTCTGCAGAACATCTCCAATCCCAACACCCCTCTCAACACCTCTGGCTGAAGTGGTTCCATTAGCAACCAGGAGAGATTCATAG 516 0.4574 MSNTTDSSGLLGSNDISGFGYGIGIAIGILLLITTITLTSYFCTRTQVPSAPPATHRRRASPIFLQPENSVVVDVGLDEATILGYPKMLYSEAKLRKSDSIATCCSICLGDYKGSDMLRVLPDCEHVFHLKCIDPWLRLHPTCPLCRTSPIPTPLSTPLAEVVPLATRRDS* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0328 171 CDD RING-H2_PA-TM-RING 104 147 - -
Dod07g0328 171 ProSiteProfiles Zinc finger RING-type profile. 105 147 IPR001841 -
Dod07g0328 171 PANTHER RING-H2 FINGER PROTEIN ATL70-LIKE 5 169 - -
Dod07g0328 171 SMART ring_2 105 146 IPR001841 -
Dod07g0328 171 Pfam Ring finger domain 105 147 IPR001841 -
Dod07g0328 171 SUPERFAMILY RING/U-box 86 152 - -
Dod07g0328 171 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 151 IPR013083 -
Dod07g0328 171 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 5 169 IPR045899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0328 Dod-Chr7 4057794 4058804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0328 2 167 C3H Transcription Factor Family AT2G35910 62.651 2.67e-62 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0328 - - gmx:121172638 245.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2974 01 70387777 70388348 Dod07g0328 07 4057794 4058804 PCT