Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0326 ATGGCTATGCAAACTGTTTATCTTAAAGAACATGAGGGAATGGTTAACAATTCAGTTGGACAGCTGTCATCTGCAACTTCAGCAGCACCATGGTGGAGTGCCTTTGGATCTCAAACAGTTTATAATGGGGAGTCTTGTGGCCAAGTGAAACCTTTTTCATTGGAGCTTCCCAACTACATAGACCAACTTTCCGGCACTAAGCAATCAGCAAGAGGAGTTGAACAATTTTTGGATAAAGGACACACAACACAGTTCACCATCTTTCCAGAAGATTGTAAAATGTCAGGTGATGCTCAAAAGCCTCAAGCAACCTTGTCACTGCAGTCATCACTTTCTGACCCTCACAACCGTTTTGAGCTAGGATTACTCAGCCTATGGAAAAATCAAGTACATATGGTAACTTGTAGACATGTTAAGAGAAGACTTTATACACAGGGACGTATAATGCTGCCACTTAACTTGACATCAGATGATGGACCAACTTATGTGAATGCTAAGCAGTACCATGGAATCATCAGGCGTAGGCAGTCCCGTGCAAAAGCTGCTCTTCAGAACAAAATGATAAAACGTCGCAAGCCATACATGCATGAATCACGCCATCTCCATGCGATGCGGCGACCAAGAGGTTGCGGTGGTCGCTTCTTGAACACAAGAAGCTCCACTAATGGAAATGGAAAGAGTAAAAATGAAGTGAACATTAACAACAAAACTGGTGGTCAACAATTGCATTCCAGTGGTTCTCAAAGTTCTGAAGTCCTGCAATCTGAGGTTGGAACTATGAATTCATCAAAAGATACCAATGGAAGCAGTCCAAACATTTCCTCAGAAGTGACCAGCATGTACTCAAGGGGAGGTCTAGTTGCTGGCTTTGCGATCAATCATCACATTGGATCTGCTGTGCACTCTCTTGCAAACATGATGGATCATAGTGGACATAGCATGATCATGTCCTCAAAATGGATTGCAGCAGCAGGCAGCTGCTGTAACCTCAAAGTTTGA 999 0.4314 MAMQTVYLKEHEGMVNNSVGQLSSATSAAPWWSAFGSQTVYNGESCGQVKPFSLELPNYIDQLSGTKQSARGVEQFLDKGHTTQFTIFPEDCKMSGDAQKPQATLSLQSSLSDPHNRFELGLLSLWKNQVHMVTCRHVKRRLYTQGRIMLPLNLTSDDGPTYVNAKQYHGIIRRRQSRAKAALQNKMIKRRKPYMHESRHLHAMRRPRGCGGRFLNTRSSTNGNGKSKNEVNINNKTGGQQLHSSGSQSSEVLQSEVGTMNSSKDTNGSSPNISSEVTSMYSRGGLVAGFAINHHIGSAVHSLANMMDHSGHSMIMSSKWIAAAGSCCNLKV* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0326 332 MobiDBLite consensus disorder prediction 194 276 - -
Dod07g0326 332 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR 3 331 - -
Dod07g0326 332 MobiDBLite consensus disorder prediction 214 276 - -
Dod07g0326 332 PRINTS CCAAT-binding transcription factor subunit B signature 191 214 IPR001289 GO:0003700|GO:0006355
Dod07g0326 332 PRINTS CCAAT-binding transcription factor subunit B signature 160 182 IPR001289 GO:0003700|GO:0006355
Dod07g0326 332 ProSiteProfiles NF-YA/HAP2 family profile. 157 217 IPR001289 GO:0003700|GO:0006355
Dod07g0326 332 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 3 331 IPR001289 GO:0003700|GO:0006355
Dod07g0326 332 SMART cbf3 156 217 IPR001289 GO:0003700|GO:0006355
Dod07g0326 332 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 160 214 IPR001289 GO:0003700|GO:0006355
Dod07g0326 332 Gene3D - 158 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0326 Dod-Chr7 4021162 4025697 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0326 1 332 CCAAT-HAP2 Transcription Factor Family AT3G05690 40.223 1.44e-49 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Dod07g0326 CBFB_NFYA 4.3e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0326 K08064 - gmx:100815382 423.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2973 01 70345735 70350644 Dod07g0326 07 4021162 4025697 PCT