Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0324 ATGCTGGAAACCTTGGACTGGGTCCTGACTTCTCAGGCTCTTAGAGATGCCTTTGCTGAGCAGCCATGCTTACTGAGTGCCAAGGTCATCTATGAACGGGACAACGGAACATCTCGCCAATACGGTTTCGTCTCCTTTGAAACTGCTGAGGATGTTGAGGCTGCTTTGAGTACTATGAATGGTGTGGAGCTTCAAAGGAGGCCCTTGAGACTGAATTTGGCTCCAGTAAAGAAGCCTTCATCTCCTCTAGCAATTGATGAAAAGACAAGAAGTTGA 276 0.4746 MLETLDWVLTSQALRDAFAEQPCLLSAKVIYERDNGTSRQYGFVSFETAEDVEAALSTMNGVELQRRPLRLNLAPVKKPSSPLAIDEKTRS* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0324 91 SUPERFAMILY RNA-binding domain, RBD 5 80 IPR035979 GO:0003676
Dod07g0324 91 Gene3D - 1 82 IPR012677 -
Dod07g0324 91 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 1 76 IPR000504 GO:0003723
Dod07g0324 91 PANTHER NUCLEOTIDE-BINDING ALPHA-BETA PLAIT DOMAIN-CONTAINING PROTEIN-RELATED 5 80 - -
Dod07g0324 91 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 5 70 IPR000504 GO:0003723
Dod07g0324 91 PANTHER OS02G0815200 PROTEIN 5 80 - -
Dod07g0324 91 SMART rrm1_1 5 72 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0324 Dod-Chr7 4017827 4018215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0324 2 74 Eukaryotic Initiation Factors Gene Family AT1G22760 36.986 9.95e-09 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0324 - - lja:Lj5g3v0841030.2 123.25