Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0323 ATGAACGACTTGTTTTCCGGCTCCTTCTCCCGCTTCCGCAGCAACGATCAAGTCTCCCCGGACAACAACCACCATGTCATCGAGATGGGGGCGGTTGACAGTGGCGGCGTCAACCTTGACAAGTTCTTTGAGGAGGTGGAGACGGTGAAGGACGAGCTGAAGGAGCTAGAGAAACTTCATGAGAGCCTAAGAAAAGCCATCCAGCAGCAAGGGAGAGCCACCATAATGGACACCATCCAAGAGATTCAAGAGAGGCATGACACAGTGATGGAGATAGAGAGGAGCCTCAATGAGCTGCACCAAGTGTTCTTGGACATGGCTGTGTTGGTCGAATCCCAGGGTCAACAACTGGATGACATAGAGAGCCACGTGGCGAGAGCCAATTCGTACGTGAGGGGTGGGGTCCAGCAGCTGCATGTTGCAAGGAAGCACCAGAAGAACACCCGGAAGTGGACCTGCATAGCCATCATAGTGTTGCTCATTATCATATTGATTATAGTCCTCCCTATTGTTCTAAGAAATTGA 525 0.5124 MNDLFSGSFSRFRSNDQVSPDNNHHVIEMGAVDSGGVNLDKFFEEVETVKDELKELEKLHESLRKAIQQQGRATIMDTIQEIQERHDTVMEIERSLNELHQVFLDMAVLVESQGQQLDDIESHVARANSYVRGGVQQLHVARKHQKNTRKWTCIAIIVLLIIILIIVLPIVLRN* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0323 174 PANTHER SYNTAXIN 13 63 IPR045242 -
Dod07g0323 174 PANTHER SYNTAXIN 63 169 IPR045242 -
Dod07g0323 174 SUPERFAMILY SNARE fusion complex 76 146 - -
Dod07g0323 174 ProSitePatterns Syntaxin / epimorphin family signature. 85 124 IPR006012 GO:0005484|GO:0006886|GO:0016020
Dod07g0323 174 SMART tSNARE_6 74 141 IPR000727 -
Dod07g0323 174 PANTHER SYNTAXIN-121-LIKE 13 63 - -
Dod07g0323 174 PANTHER SYNTAXIN-121-LIKE 63 169 - -
Dod07g0323 174 Coils Coil 39 73 - -
Dod07g0323 174 Pfam SNARE domain 116 167 IPR000727 -
Dod07g0323 174 Pfam Syntaxin 62 114 IPR006011 GO:0016020
Dod07g0323 174 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 79 141 IPR000727 -
Dod07g0323 174 Gene3D - 76 172 - -
Dod07g0323 174 CDD SNARE_syntaxin1-like 78 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0323 Dod-Chr7 4013687 4015179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0323 1 64 SNARE and Associated Proteins AT1G61290 43.939 1.41e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0323 K08486 - gmx:100808718 174.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2970 01 70334132 70336157 Dod07g0323 07 4013687 4015179 PCT