Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0318 ATGTCTAGGCTTGGAAATTTTGCAACTGGGTGCTGGAAAGCCATGACGTGCTCTAAATCATCCACTAATCAACAAGAACGTGATGATGATGGTGATGATAATAGTAACAATGGCAATGGCAATGATGTTAATGACCCTCTTGTGTGGTGCAATGATCTTGAGAAGCATTCATGTGGTGAGTTCTCTTATGCTGTGGCACAGGCCAATAGTAAAATGAGGACTTATAGCCAAGTTGAGATTGGTTCCAATGCAATCTTTGTTGGAATCTATGATGGCCATGTTGGTCCCCACACTGCCAAGTATATTAATAGGGCCCTCTTTACCAACCTTGTAGGAATTGCTAGGGAACGTGGCACTATTTCTGAACAAGCTATAGAGGATGCTATCACTGCCACTGAGGGAGGGTTTCTGACTCTTGTTCGAAGGGCTCAACCATTGAAGCCAAAGATTGTAATTAACGGTTCATGTTGTTTGATTGGTGTCATATGGAAAGGGACACTTTTCATTGCACATATTGGAGACTCTCGTGCTGTAAATGGTGTGATACAAGATTCAGACAACAACAGCCTACTTCCTCTGCAAATGACCTTAGAACACAATGTTAACATTTTTTGGATCAGACAAGAAGTTAGGAATTCACATCCTGATGATCCAAATCTTGTGGTTCAGGGTGATGATGGTGTATGGCGTATCAAAGGCATTACCCAGATATCTAGATCTATTGGTGATGCTTATTTAAAGCGGGATGAGTTCACAGTTCCTTCAAAATTTACAGGGTTTCAATTACCCAGTCCACTCACAGAGCCTGCCCTATCAGCATTACCATTTCTACAATCAAGAGATATAGCAGCCTCTGATAGGTTCTTTATATTTGCATCTCGTGAATTTTGGGGGCTCTTGACAAATCATAGAGTTGCTCAGATTGTTTATAATAACCCAAGAACGGGAATTGCAAGAAGGCTTATGAAGACTGCTCTAGAGGAGGCAGCTAGAAGAGCTGGCATCAGATACAGAGACCTTCCTGATATTCCCAAGGGGAGCAGGCGAGCCATACATGATGATATTGCTGTGATTGTTGTCTTTATAGACCATGAGTTTGTTGGGCAGAAAGATACTGCTCTGGAGCAGAGGTCCTTCAAAGGGTTCACTGATGCTGCTGAACAATCAGATTTTAGGAACATTGATGATTTGATGTGA 1197 0.4202 MSRLGNFATGCWKAMTCSKSSTNQQERDDDGDDNSNNGNGNDVNDPLVWCNDLEKHSCGEFSYAVAQANSKMRTYSQVEIGSNAIFVGIYDGHVGPHTAKYINRALFTNLVGIARERGTISEQAIEDAITATEGGFLTLVRRAQPLKPKIVINGSCCLIGVIWKGTLFIAHIGDSRAVNGVIQDSDNNSLLPLQMTLEHNVNIFWIRQEVRNSHPDDPNLVVQGDDGVWRIKGITQISRSIGDAYLKRDEFTVPSKFTGFQLPSPLTEPALSALPFLQSRDIAASDRFFIFASREFWGLLTNHRVAQIVYNNPRTGIARRLMKTALEEAARRAGIRYRDLPDIPKGSRRAIHDDIAVIVVFIDHEFVGQKDTALEQRSFKGFTDAAEQSDFRNIDDLM* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0318 398 Gene3D - 20 373 IPR036457 -
Dod07g0318 398 ProSiteProfiles PPM-type phosphatase domain profile. 62 362 IPR001932 -
Dod07g0318 398 CDD PP2Cc 79 362 IPR001932 -
Dod07g0318 398 ProSitePatterns PPM-type phosphatase domain signature. 86 94 IPR000222 GO:0043169
Dod07g0318 398 SUPERFAMILY PP2C-like 77 363 IPR036457 -
Dod07g0318 398 PANTHER ALPHABET, ISOFORM E-RELATED 24 381 - -
Dod07g0318 398 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 24 381 - -
Dod07g0318 398 Pfam Protein phosphatase 2C 82 330 IPR001932 -
Dod07g0318 398 MobiDBLite consensus disorder prediction 22 42 - -
Dod07g0318 398 SMART PP2C_4 40 360 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0318 Dod-Chr7 3949899 3953311 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0318 47 391 PP2C-type Phosphatase Gene Family AT5G06750 49.568 9.96e-117 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0318 K01102 - gmx:100778238 380.563