Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0313 ATGGCTGATGGTCACGAGACTGACAGCAGCATCGAGGTATGGAAGATCAAGAAATTGATCAAAGCTCTTGAGGCTGCTAGAGGAAATGGGACGAGTATGATTTCCCTTATCATGCCCCCCCGTGATCAAATCTCTCGTGTTACCAAGATGCTTGGTGATGAGTTTGGTACAGCTTCAAACATCAAGAGCAGAGTGAATCGACAGTCTGTGCTTGGTGCAATCACTTCTGCCCAGCAGAGGCTTAAGCTTTACAGCAAGATTCCTCCAAACGGGCTTGTTCTGTATACTGGCACAGTTGTGACCGAAGATGGGAAGGAAAAGAAGGTGACTTTTGATTTTGAGCCTTTCAGACCTATCAATGCTTCCCTCTATCTATGTGACAACAAATTTCATACTGAAGCTCTCAATGAGCTCCTGGAGTCAGATGACAAGTATGGATTTATTGTCAGGGATGGTAATGGTACCCTGTTTGGGACCTTGAGTGGTAACACGAGAGAGGTGCTTCATAAATTCAGTGTGGACCTCCCAAAGAAACATGGAAGAGGAGGGCAATCAGCTCTTCGATTTGCCCGTCTTCGCATGGAGAAGCGTCACAACTATGTGAGGAAGACTGCAGAGCTTGCAACGCAGTTCTATATCAATCCTGCTACCAGCCAGCCGAATGTTTCTGGATTAATACTTGCTGGTTCAGCTGATTTCAAAACTGAGCTTAGTCAGTCGGATATTTTTTATCCTCGACTCAAGGCGAAAATTCTTAATGTTGTAGATGTATCCTATGGAGGGGAGAATGGGTTCAATCAGGCTATCAAACTCTCTGCTGAGATTCTGTCCAGTGTGAAGTTTATCCAGGAGAAACGCTTGATTGAAAAATACTTTGAGGAACTTAGCCAGAAGACTAGAGCTGTAGGGGTTGATGAAACTCTGACGGCTCTGAAGATGGGAGCTGTTGAGACACTTATTGTCTGGGAAAATCTGGATGTGAACAGATTTGTCTTGAAAAATAGTGCTACCGGTGAGGTTGTCACTAAGCACTTCGACAAGGAAGAGGAGGCCAAAGAGAGCAATTTCCGGGATCCTGAAACCAATGCTGATTATGAGGTTCAGGAAGAGACGGCTTTTGATGGAATAGGTGGGATCTTGCGTTACCCGGTCTCATTTGATGATTTCGCAGTAGATGGAGGTGAAGATTACTCTGATGATAGAGGTGAAGAGGAGGCCGACATACCCGCACCAGTAAGTGAGGGGGTTGCATGTGCTGCAATTGCCGCCGCCGCCGCTGCTCCTCTTCCTCCTCCTCATCCTTCTGTGTGGTTGCATGAAAAGTTTGATTATCTGTCAAGATGCTTTGCCACAACAGTCTCTCTGACCGATCCAAGCTACTACTCTCCTGCATGA 1395 0.4609 MADGHETDSSIEVWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYSKIPPNGLVLYTGTVVTEDGKEKKVTFDFEPFRPINASLYLCDNKFHTEALNELLESDDKYGFIVRDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQSDIFYPRLKAKILNVVDVSYGGENGFNQAIKLSAEILSSVKFIQEKRLIEKYFEELSQKTRAVGVDETLTALKMGAVETLIVWENLDVNRFVLKNSATGEVVTKHFDKEEEAKESNFRDPETNADYEVQEETAFDGIGGILRYPVSFDDFAVDGGEDYSDDRGEEEADIPAPVSEGVACAAIAAAAAAPLPPPHPSVWLHEKFDYLSRCFATTVSLTDPSYYSPA* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0313 464 Gene3D eRF1 domain 1 2 135 IPR024049 -
Dod07g0313 464 PANTHER EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1-3-LIKE 1 371 - -
Dod07g0313 464 Pfam eRF1 domain 1 18 138 IPR005140 -
Dod07g0313 464 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 1 371 IPR004403 GO:0003747|GO:0006415
Dod07g0313 464 SUPERFAMILY Translational machinery components 142 276 - -
Dod07g0313 464 Gene3D eRF1 domain 2 136 277 IPR042226 -
Dod07g0313 464 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 6 140 IPR024049 -
Dod07g0313 464 TIGRFAM aRF1/eRF1: peptide chain release factor 1, archaeal and eukaryotic forms 13 370 IPR004403 GO:0003747|GO:0006415
Dod07g0313 464 Pfam eRF1 domain 3 281 384 IPR005142 -
Dod07g0313 464 SUPERFAMILY L30e-like 279 387 IPR029064 -
Dod07g0313 464 SMART eRF1_1_2 4 140 IPR005140 -
Dod07g0313 464 Gene3D - 279 372 IPR029064 -
Dod07g0313 464 Pfam eRF1 domain 2 144 277 IPR005141 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0313 Dod-Chr7 3860013 3861974 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0313 1 400 Eukaryotic Initiation Factors Gene Family AT5G47880 74.424 0.0 653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0313 K03265 - gmx:100785916 666.766