Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0311 ATGGCGACATATTTTCATAGTAATTCGGAAATCCAAGGTGGTGGTGCTGCTGCTGATGGCCTTCAAACCCTTGTCCTCATGAACCCCGGTTACATCCAATACTCCGACACGCCGCCGCCGTCGCAGCCACCACCACCACACGGCGGAAACCTTCTGTTTCTCAACTCAGCCATCGCCGCAGCCGGAAACAACTCCTTCCTCTCTCCCGCGCCGCCGTCGTCTCACGGCCAACAATTCCTTGGCGTCCCCCTCTCCGCCGCCGAGCAGTCCATGCATGGCCATCATGATGTCTCCTCCTCGGCCTTGCATGGCTTCATGCCGCGTGTGCAGTACAACCTTTGGAACCCAATTGACCCCAACTCGGCGGCGCGTGAGGCCACACGCGCCACCCAGGGGCTCTCCCTCAGCCTTCCTGCTATGTCTGGCGAAGATGTGCGGGTCTCCGGTGGGTCCTCATCTTCTGCTTCGGGTGTTACCAATGGTGGTGGTGGTGTATCGGGGATTCGAAGTGTGCTTTTGAGTTCAAAGTACTTGAAGGCGACACAAGAACTTCTAGAAGAGGTTGTGAATGTTAACAATGGTGTTAAGAGTAGTACTGATCAAGTTAAGAAGAGTTTTGAGAAGACTAAGGTTGTTGGAGAATCATCTGGTGGTGCTGCTAGTGGAGATCGTTCGGTTGGTGGTGGTGAGGGGAGTGGGAGTAAGCGTGGCTCTGAGTTATCAGCCACTGAGAGACAAGAAATTCAGATGAAGAAGGCAAAGCTCATGGCCATGCTTGATGAGGTGGAGCAAAGGTACAGGCAGTACCACAACCACATGCAGATTGTGATTTCCTCATTTGAGCAAGCTGCTGGGAGTGGCTCAGCGAGGACATACACTGCCCTTGCACTTCAAACAATCTCCAAGCAGTTTAGGTGCTTGAAAGATGCCATAACAGGCCAAATTAAGGCAGCAAATAAGAGCTTAGGTGAAGAGGATTATTGCTTTGGGGGCAAAATGGAAGGTTCAAGGCTCAAATACGTTGACCATCACCTGAGGCAACAGAGAGCTATCCAGCAGTTGGGAATGATCCATCACAATGCTTGGAGACCCCAGAGAGGATTGCCAGAGAGATCAGTTTCTGTCCTCCGTGCTTGGCTCTTTGAACACTTCCTCCACCCTTATCCCAAGGATTCAGACAAACACATGCTGGCAAAACAAACAGGGCTTACAAGGAGCCAGGTGTCAAATTGGTTCATAAATGCTAGAGTCAGGCTTTGGAAGCCAATGGTGGAAGAAATGTACATGGAGGAGATGAAGGAGCATGAGATGAATGGTTCTGAGGACAAATCAAGCAAGAGCAGTGAAGATCCTGCTGTGAAAACTGCATCTGCTTCACAGGAGAAAGGTACTAACTCTGAAACTAAAGCCAAATGTTTCAATCCCAAACAAGATGTTTCTGGGAACCAGAACGCCCCAATTCTTTCAGTTTCCACACAATTATCTACATCACCAGTTGGAGGCAATGTGAGGAACCAATCAGGGTTCAGCTTCATAGGGTCATCAGAACTAGAGGGAATCACACAAGGAAGCCCCAAGAAACGAAGGAACCACGACATTATGCACCCTTCAATTAGCATTGATGTCAAGCCAAATAATGAGGCAAACAATGAGCAACTCTCAATGAAATTTGGTGATGATGATAGGCAAGGAAGAGATGTATACTCCTTCATGGGGAACCAAACAAACTTCATAAGTGGTTTTGGACAGTACCCTATTGAGGAAATTGGAAGGTTTGATGCAGAACAATTCACACCAAGGTTCTCAGGTAATAATGGGGTGTCACTAACTCTTGGTCTTCCACGTTGTGACACATTATCAGGAACGCATCAAACATTCCTCCCAAACCAGAACGTTCAACTAGGAAGAAGGTTGGACATGAGTGAACCAAATGAGTTTGGTGCCATGAACACTCCCACTCCTCATTCTTCAGCTGCATTTGAGAGTATCAACAGCATGCAGAATCCAAAGAGGTTTGCTGCACAATTGTTGCCAGACTTTGTGGCCTAA 2049 0.4846 MATYFHSNSEIQGGGAAADGLQTLVLMNPGYIQYSDTPPPSQPPPPHGGNLLFLNSAIAAAGNNSFLSPAPPSSHGQQFLGVPLSAAEQSMHGHHDVSSSALHGFMPRVQYNLWNPIDPNSAAREATRATQGLSLSLPAMSGEDVRVSGGSSSSASGVTNGGGGVSGIRSVLLSSKYLKATQELLEEVVNVNNGVKSSTDQVKKSFEKTKVVGESSGGAASGDRSVGGGEGSGSKRGSELSATERQEIQMKKAKLMAMLDEVEQRYRQYHNHMQIVISSFEQAAGSGSARTYTALALQTISKQFRCLKDAITGQIKAANKSLGEEDYCFGGKMEGSRLKYVDHHLRQQRAIQQLGMIHHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYMEEMKEHEMNGSEDKSSKSSEDPAVKTASASQEKGTNSETKAKCFNPKQDVSGNQNAPILSVSTQLSTSPVGGNVRNQSGFSFIGSSELEGITQGSPKKRRNHDIMHPSISIDVKPNNEANNEQLSMKFGDDDRQGRDVYSFMGNQTNFISGFGQYPIEEIGRFDAEQFTPRFSGNNGVSLTLGLPRCDTLSGTHQTFLPNQNVQLGRRLDMSEPNEFGAMNTPTPHSSAAFESINSMQNPKRFAAQLLPDFVA* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0311 682 MobiDBLite consensus disorder prediction 210 244 - -
Dod07g0311 682 MobiDBLite consensus disorder prediction 433 483 - -
Dod07g0311 682 Coils Coil 245 272 - -
Dod07g0311 682 MobiDBLite consensus disorder prediction 450 483 - -
Dod07g0311 682 Pfam Associated with HOX 171 312 IPR006563 -
Dod07g0311 682 MobiDBLite consensus disorder prediction 433 449 - -
Dod07g0311 682 Gene3D - 365 444 - -
Dod07g0311 682 SMART HOX_1 362 426 IPR001356 GO:0003677
Dod07g0311 682 CDD homeodomain 362 422 IPR001356 GO:0003677
Dod07g0311 682 ProSiteProfiles 'Homeobox' domain profile. 359 422 IPR001356 GO:0003677
Dod07g0311 682 SUPERFAMILY Homeodomain-like 363 429 IPR009057 -
Dod07g0311 682 PANTHER HOMEOTIC PROTEIN, PUTATIVE-RELATED 7 640 - -
Dod07g0311 682 SMART prehox3 166 313 IPR006563 -
Dod07g0311 682 Pfam Homeobox KN domain 379 418 IPR008422 GO:0003677|GO:0006355
Dod07g0311 682 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 7 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0311 Dod-Chr7 3824649 3830755 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0311 1 682 Homeobox Transcription Factor Family AT2G35940 48.742 1.58e-173 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Dod07g0311 POX 1.6e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0311 - - gmx:100810851 922.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0311 07 3824649 3830755 Dod07g0311 07 3824649 3830755 ECH
Dod01g2960 01 70214626 70217801 Dod07g0311 07 3824649 3830755 PCT