Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0302 ATGGCACTGATTGAGTTTCTTGGTGGGTTGAATTATCCTTCAAATCTGGCCAATTCATGGACTGGTGATAACCCTTGTGATGGGCCATGGTTGGGGATAAAGTGCAATGCCGATGGAAAGGTGTCTATGATTATTTTGTCTAACTTTAATCTTAGTGGCACACTTAGTCCTTCCGTTGCAAACTTAGATTCTCTTGTTGAAATCAGATTAGGGGGTAACAATCTCAGTGGTGTGGTGCCTAGTAACTGGACTAGCTTGAGATTCCTGACCCTGTTGGATCTAAGTAGCAATAAAATTTCAGGTCCACTGCCAAATTTTGGTAAAAGCTTGAAAGTTGTGACTGATGGGAATCCTCTGTCGAATATTCATGGTAGCTCAGAAGCTCCTTCATCAGTGAGTGGTAGCACATCATCTGGAAAGGGTGAACCTTCTTCACCTGATACTCCTAATCCACCGGCGCAATCAAACTCCAATGCTAGTAATTCTATTGAATTGAAAAATCCCAAAAGGAAAAACTTGGTTTCATTTATTGCCCCTGTTGCAGGTGTTGCTGCTGCAGCTTTTCTGTTTATTCCCCTTTATATATATTGTTTCAGGAGGAGAAAGGAAGCCTCCAAGGGTCCAAGTTCACTAGTGATTCACCCTGGAGATCCATCTGATTTGGACAATGTGTTAAAGATTGTTGTTGCTAGCAATAACAATGGAGACATTTCCACCGTAACCGGCAGTGGTTCTGGGAGTCTAAACAGCAGTGGAAATGGGGAGTCTCATGTCATTGAAGCTGGAAATCTTGTGATATCAGTTCAAGTTCTTCGAGCTGTGACTAAGAATTTTGCACCGGAGAATGAGCTTGGCCGTGGCGGATTTGGGGTTGTTTACAAGGGAGAATTGGATGATGGGACTAAAATTGCAGTTGAAGGTACTGAGAGGCTACTAGTTTATGAGTATATGCCCCAAGGTGCTCTCAGCAAGCATCTTTTCCATTGGAAGAGCTTAAAATTGGAGCCCCTATCTTGGAAGAGGAGGCTCATTATTGCCTTGGATGTTGCTAGAGGAATGGAGTATCTTCACACTCTGGCGCACCAGAGTTTCATCCACAGAGATCTTAAGTCATCAAATATTTTGCTTGGGGATGACTTCAGAGCAAAAGTCTCAGATTTTGGACTAGTTAAGCTTGCCCCAGATGGCAAACAATCTGTAGTGACCCGGCTTGCTGGTACATTTGGATACTTGGCACCAGAATATGCAGTGACAGGAAAAATCACTACCAAAGCAGATGTTTTCAGTTTCGGTGTTGTGCTAATGGAGCTGTTGACTGGATTGATGGCACTTGATGAGGATAGGCCTGAGGAAAGCCAATACCTTGCATCATGGTTCTGGCACATAAAATCAAATAAGGAGAAACTGATGACTGCTATTGATCCAGCCCTTGACATAAAGGAAGAAACCTCTGAGACAATCTGCATTATTGCTGAGTTAGCCGGCCACTGCACTGCTAGAGAACCAAATCAACGGCCGGATATGGGTTATGCTGTGAATGTTCTGGCACCGCTTGTCGAAAAATGGAAACCATACGATGATGACACTGAGGAGTATTGTGGCATAGATTATAGTCTCCCACTTAACCAAATGGTGAAGGGGTGGCAAGAGACAGAAGGAAAGGACTTGAGCTATATGGACCTACAAGACAGTAAAAGTAGTATCTCTGCAAGGCCTACTGGTTTTGCAGAGTCTTTTACTTCTGCTGATGGCCGATGA 1758 0.4363 MALIEFLGGLNYPSNLANSWTGDNPCDGPWLGIKCNADGKVSMIILSNFNLSGTLSPSVANLDSLVEIRLGGNNLSGVVPSNWTSLRFLTLLDLSSNKISGPLPNFGKSLKVVTDGNPLSNIHGSSEAPSSVSGSTSSGKGEPSSPDTPNPPAQSNSNASNSIELKNPKRKNLVSFIAPVAGVAAAAFLFIPLYIYCFRRRKEASKGPSSLVIHPGDPSDLDNVLKIVVASNNNGDISTVTGSGSGSLNSSGNGESHVIEAGNLVISVQVLRAVTKNFAPENELGRGGFGVVYKGELDDGTKIAVEGTERLLVYEYMPQGALSKHLFHWKSLKLEPLSWKRRLIIALDVARGMEYLHTLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPDGKQSVVTRLAGTFGYLAPEYAVTGKITTKADVFSFGVVLMELLTGLMALDEDRPEESQYLASWFWHIKSNKEKLMTAIDPALDIKEETSETICIIAELAGHCTAREPNQRPDMGYAVNVLAPLVEKWKPYDDDTEEYCGIDYSLPLNQMVKGWQETEGKDLSYMDLQDSKSSISARPTGFAESFTSADGR* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0302 585 PANTHER OSJNBA0070M12.3 PROTEIN 1 305 - -
Dod07g0302 585 Gene3D Phosphorylase Kinase; domain 1 241 311 - -
Dod07g0302 585 SMART serkin_6 278 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0302 585 Gene3D Ribonuclease Inhibitor 1 123 IPR032675 -
Dod07g0302 585 PANTHER RECEPTOR PROTEIN KINASE TMK1-LIKE 1 305 - -
Dod07g0302 585 PANTHER RECEPTOR PROTEIN KINASE TMK1-LIKE 305 585 - -
Dod07g0302 585 ProSiteProfiles Protein kinase domain profile. 198 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0302 585 Pfam Protein tyrosine and serine/threonine kinase 305 512 IPR001245 GO:0004672|GO:0006468
Dod07g0302 585 MobiDBLite consensus disorder prediction 118 144 - -
Dod07g0302 585 PANTHER OSJNBA0070M12.3 PROTEIN 305 585 - -
Dod07g0302 585 MobiDBLite consensus disorder prediction 118 164 - -
Dod07g0302 585 SUPERFAMILY L domain-like 2 110 - -
Dod07g0302 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 364 376 IPR008271 GO:0004672|GO:0006468
Dod07g0302 585 SUPERFAMILY Protein kinase-like (PK-like) 256 515 IPR011009 -
Dod07g0302 585 Gene3D Transferase(Phosphotransferase) domain 1 317 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0302 Dod-Chr7 3750706 3753190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0302 166 523 Receptor kinase-like Gene Family AT3G58690 32.915 5.02e-58 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Dod07g0302 PK_Tyr_Ser-Thr 2.1e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0302 - - lja:Lj1g3v4730400.1 865.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0302 07 3750706 3753190 Dod07g0302 07 3750706 3753190 ECH
Dod01g2953 01 70071263 70073983 Dod07g0302 07 3750706 3753190 PCT