Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod07g0281 | ATGTCTAGCTCCAGAAGAAAGCTTACTGTGAACACTGTGTCTGTGAACATTGGCTGTGGAAGCTGCAGAAGACCAAAGCTTTCCCACATGTTCCATCCAAAGCCAAAACCAAAGAACCCCTCTTACCAAAAACACAAGCACTACCGCCACCACTCTTCTTATGACACAGCCACAACAAGCACAACCACCACCAACGCCACTTCCACAACACTCTCTCCTCATTGCCATGTTGAGTCCTCACATCAGTTTTGTGATGACTACAACATGATGAAGCCTTGTTCAAGAACTACAGTTAAAGGGTTTGGAAGAGTTGGAAGTGAAGGTGTTGCTGTGGAGAAAGATTCTGAAGACCCTTATCTAGATTTCAGGCATTCCATGCTCCAAATGATATTGGAGAATGAGATATACACAAAAGATGGTCTTAGGGAGCTTCTGAACTGCTTCCTTCAGCTTAATTCACCAGACCACCATGGTGTTATTGTAAGGGCTTTCACTGAGATCTGGAATGGGGTCTTCTCTGTGAGGTCCAACCCATCACCAAGGTTTCACTCGACCACCCAAATAAATTGTAAACCACCAATTCATTATTCAAAAGAAGCCACCGCTTATTGTTGCATGGACATCAGCACGGGTAGCCAATATAAGTCTAATACGAAAGTACGACATAGATTAAATTAA | 678 | 0.4336 | MSSSRRKLTVNTVSVNIGCGSCRRPKLSHMFHPKPKPKNPSYQKHKHYRHHSSYDTATTSTTTTNATSTTLSPHCHVESSHQFCDDYNMMKPCSRTTVKGFGRVGSEGVAVEKDSEDPYLDFRHSMLQMILENEIYTKDGLRELLNCFLQLNSPDHHGVIVRAFTEIWNGVFSVRSNPSPRFHSTTQINCKPPIHYSKEATAYCCMDISTGSQYKSNTKVRHRLN* | 226 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod07g0281 | 225 | TIGRFAM | A_thal_3678: uncharacterized plant-specific domain TIGR01568 | 109 | 169 | IPR006458 | - | |
Dod07g0281 | 225 | PANTHER | TRANSCRIPTION REPRESSOR OFP6 | 1 | 179 | - | - | |
Dod07g0281 | 225 | PANTHER | TRANSCRIPTION REPRESSOR OFP7-RELATED | 1 | 179 | IPR038933 | GO:0045892 | |
Dod07g0281 | 225 | MobiDBLite | consensus disorder prediction | 51 | 72 | - | - | |
Dod07g0281 | 225 | MobiDBLite | consensus disorder prediction | 54 | 72 | - | - | |
Dod07g0281 | 225 | ProSiteProfiles | OVATE domain profile. | 111 | 170 | IPR006458 | - | |
Dod07g0281 | 225 | Pfam | Transcriptional repressor, ovate | 115 | 171 | IPR006458 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod07g0281 | Dod-Chr7 | 3505299 | 3506459 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | OFP | Dod07g0281 | Ovate | 1.1e-23 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod07g0281 | - | - | pvu:PHAVU_007G269800g | 233.802 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod07g0281 | 07 | 3505299 | 3506459 | Dod07g0281 | 07 | 3505299 | 3506459 | ECH |