Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0274 ATGGGCGGAGTCCACACCAAGACCGTGAAGAAATCCTCCCGGCAAGTAATCGAGCGCTACTACTCGCGAATGACACTGGACTTCCACACGAACAAGAAGCTTCTAGAAGAAGTCATGAAGCGAATCCAGAAGGGACCAGTGAGAGGAATCTCCCTCAAGCTCCAAGAAGAAGAGCACTTGGGCTCGGCAAAGATAACTATTCTTTAG 207 0.4976 MGGVHTKTVKKSSRQVIERYYSRMTLDFHTNKKLLEEVMKRIQKGPVRGISLKLQEEEHLGSAKITIL* 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0274 68 PANTHER 40S RIBOSOMAL PROTEIN S17 1 38 IPR001210 GO:0003735|GO:0005840|GO:0006412
Dod07g0274 68 PANTHER 40S RIBOSOMAL PROTEIN S17 38 59 IPR001210 GO:0003735|GO:0005840|GO:0006412
Dod07g0274 68 PANTHER 40S RIBOSOMAL PROTEIN S17 38 59 - -
Dod07g0274 68 PANTHER 40S RIBOSOMAL PROTEIN S17 1 38 - -
Dod07g0274 68 Gene3D - 1 49 IPR036401 GO:0003735|GO:0005840|GO:0006412
Dod07g0274 68 SUPERFAMILY Rps17e-like 1 44 IPR036401 GO:0003735|GO:0005840|GO:0006412
Dod07g0274 68 Pfam Ribosomal S17 1 38 IPR001210 GO:0003735|GO:0005840|GO:0006412
Dod07g0274 68 Pfam Ribosomal S17 37 59 IPR001210 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0274 Dod-Chr7 3419633 3419874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0274 1 58 Cytoplasmic Ribosomal Protein Gene Family AT2G05220 70.130 1.40e-29 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0274 K02962 - gmx:100527036 99.3673