Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0250 ATGTCCTCCATTCTTCTTCTAAAACCTCACCCTCCCTTCCAATTCCCAACCCAACACCACCGCCACCACCACCACCATAATCTAAAATTAACACCCCCCCATAAACACCTTTTCTTCCCAAAATACCCTTCATCCCCACCACCACCACTTTCCTCCACTAAAATCCAGAACTCCACCACCACCACCACCACAACTGAAGACCCTTCAAACCTCAAAAAAATCCAAACTTTCCAATTCCTCAAGCCTTTCCTCATCTCACAGCACAAACCCATCATCTTGGGGTGGCTCTGCAGCGCCATCTCAGTCTTCTCACTCTCCCAGCTCGTCTCAAAACTCGGCAAATTCAACGCCATAGATGCTACCCAATTGAGGAGCCATGGTTTCTTCTTGTTGGCTTTGGTTGCTGCCCGTTTGGTAGCAGGTTACGGGCAGCATGCCCTTCTCTGGGACGCTTCCCTTAAGGCCGTGTACGAGGTTCGTGTCCACGTGTTCGACCGTGTTCTTGAGAGGGAATTGGGGTACTTCGAAGGAAGGAATGGTGGTGGCACAGCTGGAGACATTGCATATAGAATCACTGCTGAAGCTTCAGACGTTGCTGACACTCTTTATGCCGTTCTCAATACCATAGTACCCAGTACTCTCCAGCTATCGGCGATGATGGCGAATATGTTAGTTATAAGTCCTGTCCTTTCTTTGATTTCCGTCACGGTTCTCCCTTGCATGTCACTTGTTGTTGCCTATCTCGGTCAAGAACTTCGTAAGATATCTAGAGCAGCACATCTTAGCATTGCTGCTCTCTCAGCGTATCTAAATGAGATGCTCCCTGCGATTCTCTTTGTGAAAGCAAACAATGCAGAGCTGTGCGAGAGTGCCAGGTTTAAGAGGTTGGCTCAGATCGACTATTCTGCAAAGCTGAACAAGAAGAGGATGAAATCAGTCATTCCTCAGGTCATTCAAGCTATTTATTTTGGAACCCTCTCCATACTATGTGCTGGTTCGCTGGTGATTTCAAGAGGTTCATTTGATGGCCAGAGCTTCGTTTCATTTGTGACATCATTGCTTTTCTTGATTGAACCAATCCAGGATGTGGGAAAAGCTTATAATGAATGGAGGCAGGGAGAACCAGCTATCGAACGCTTGTTTGCTATGACCATGTTTAAAGATAAGGTGGTTGAGAAACCAGATGCTGTTGATATAGACAATGTTACTGGGGACCTGAAATTCCATGACGTCTCATTTAAATATAATGATGATATGCCACATGTTTTAAATGGGTTGAATCTTCACATTAGAGCTGGAGAGATAGTTGCTCTCGTGGGTCCTTCTGGTGGAGGGAAAACAACCCTTGTAAAACTGTTGCTTCGGCTTTATGATCCTATATCTGGCTGTATACTGATTGATGACCATAACATCCAAAATATTCGGTTGCGTAGTTTGAGGAGACATGTTGGTCTCGTTTCTCAAGATATAACACTTTTTTCAGGTACAATTGCTGAAAACATTGGTTATAGGGATCTGACAACTAAAATTGACATGGAGAGGGTAAAGCATGTAGCGCAAACTGCACATGCAGATGAGTTTATTAGAAAACTTCCAGAAAGATACGAAACCAATATTGGACCGAGAGGCTCAACCTTAAGTGGAGGCCAGAGGCAAAGGCTGGCTATTGCAAGGGCACTTTATCAGGATCCTTCTATTTTAATTCTGGATGAGGCAACTTCTGCTTTAGATAGTAAATCTGAGTTATTTGTGAGACAAGCAGTAGAGTGTTTGATGGAAAATCGCACTGTTCTTGTCATCGCCCATCGCCTGGAAACTGTTTTGATGGCTAAAAGAGTATTCCTTATGGATAATGGGAAGCTAAAAGAGGTGCCGAGATCAACTATGTTGAATGGTCACAAGGGTTCATTGTTATCATCTGGGCTTGTTATTTGA 1935 0.4429 MSSILLLKPHPPFQFPTQHHRHHHHHNLKLTPPHKHLFFPKYPSSPPPPLSSTKIQNSTTTTTTTEDPSNLKKIQTFQFLKPFLISQHKPIILGWLCSAISVFSLSQLVSKLGKFNAIDATQLRSHGFFLLALVAARLVAGYGQHALLWDASLKAVYEVRVHVFDRVLERELGYFEGRNGGGTAGDIAYRITAEASDVADTLYAVLNTIVPSTLQLSAMMANMLVISPVLSLISVTVLPCMSLVVAYLGQELRKISRAAHLSIAALSAYLNEMLPAILFVKANNAELCESARFKRLAQIDYSAKLNKKRMKSVIPQVIQAIYFGTLSILCAGSLVISRGSFDGQSFVSFVTSLLFLIEPIQDVGKAYNEWRQGEPAIERLFAMTMFKDKVVEKPDAVDIDNVTGDLKFHDVSFKYNDDMPHVLNGLNLHIRAGEIVALVGPSGGGKTTLVKLLLRLYDPISGCILIDDHNIQNIRLRSLRRHVGLVSQDITLFSGTIAENIGYRDLTTKIDMERVKHVAQTAHADEFIRKLPERYETNIGPRGSTLSGGQRQRLAIARALYQDPSILILDEATSALDSKSELFVRQAVECLMENRTVLVIAHRLETVLMAKRVFLMDNGKLKEVPRSTMLNGHKGSLLSSGLVI* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0250 644 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 92 372 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod07g0250 644 SMART AAA_5 432 620 IPR003593 -
Dod07g0250 644 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 406 643 IPR003439 GO:0005524
Dod07g0250 644 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 53 634 IPR039421 -
Dod07g0250 644 CDD ABC_6TM_exporters 91 380 - -
Dod07g0250 644 MobiDBLite consensus disorder prediction 51 67 - -
Dod07g0250 644 ProSitePatterns ABC transporters family signature. 546 560 IPR017871 GO:0005524
Dod07g0250 644 Pfam ABC transporter transmembrane region 93 359 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod07g0250 644 Pfam ABC transporter 423 574 IPR003439 GO:0005524
Dod07g0250 644 MobiDBLite consensus disorder prediction 44 67 - -
Dod07g0250 644 PANTHER ABC TRANSPORTER B FAMILY MEMBER 29, CHLOROPLASTIC 53 634 - -
Dod07g0250 644 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 395 630 IPR027417 -
Dod07g0250 644 Gene3D - 396 639 IPR027417 -
Dod07g0250 644 Gene3D ABC transporter type 1, transmembrane domain 67 384 IPR036640 GO:0005524|GO:0016021
Dod07g0250 644 SUPERFAMILY ABC transporter transmembrane region 80 384 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0250 Dod-Chr7 3217402 3222672 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0250 126 624 Calmodulin-binding Proteins AT2G36910 28.488 1.02e-54 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0250 K02021 - gmx:100788075 851.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0250 07 3217402 3222672 Dod07g0250 07 3217402 3222672 ECH