Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0231 ATGGCGGAAGAACATCGATGCCAAGCTCCAGAAGGTCACAGACTCTGCGCCAACAACTGCGGCTTCTTCGGTAGCCCAGCAACCATGAATCTCTGCTCCAAATGCTTCGGAGAACAAGAATCCACCAAATCCACTATCGAAAGCGCTCTCTCCTCCGCCGCCGCCACCGCCATCGTTCCTTCTCCGCTGCCGTCAACATCATCTCCGCCGCCACCTTCGGCCGCTGCAGAACCATCTGCTCCTCAACCGGCCGGGCTCGCGTCGAGCTCCGTAACCGTCGCCGCGAATCACGGAGCACCGGTTCAACCGAGCCGGTGTGCTTCGTGCCGGAAACGGGTTGGTCTGACCGGTTTCAAGTGCAGGTGCGGGGTTACGTACTGTGGGGCCCACAGGTACCCAGAGAAGCACGCGTGCAGCTTCGATTTTAAGGCGGTAGGGAGAGAGGAGATAGCACGTGCCAACCCCGTGATCAAAGCGGAGAAGCTCCAGAGGATTTGA 498 0.5944 MAEEHRCQAPEGHRLCANNCGFFGSPATMNLCSKCFGEQESTKSTIESALSSAAATAIVPSPLPSTSSPPPPSAAAEPSAPQPAGLASSSVTVAANHGAPVQPSRCASCRKRVGLTGFKCRCGVTYCGAHRYPEKHACSFDFKAVGREEIARANPVIKAEKLQRI* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0231 165 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Dod07g0231 165 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 1 165 - -
Dod07g0231 165 ProSiteProfiles Zinc finger AN1-type profile. 100 146 IPR000058 GO:0008270
Dod07g0231 165 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 165 - -
Dod07g0231 165 SUPERFAMILY AN1-like Zinc finger 100 160 IPR035896 -
Dod07g0231 165 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 45 - -
Dod07g0231 165 Pfam A20-like zinc finger 14 36 IPR002653 GO:0003677|GO:0008270
Dod07g0231 165 Pfam AN1-like Zinc finger 106 142 IPR000058 GO:0008270
Dod07g0231 165 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Dod07g0231 165 Gene3D - 1 63 - -
Dod07g0231 165 MobiDBLite consensus disorder prediction 59 91 - -
Dod07g0231 165 MobiDBLite consensus disorder prediction 63 78 - -
Dod07g0231 165 SMART AN1_Zf_4 106 143 IPR000058 GO:0008270
Dod07g0231 165 Gene3D - 82 161 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0231 Dod-Chr7 3044992 3047182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0231 1 165 C2H2 Transcription Factor Family AT3G52800 50.289 4.73e-53 164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0231 07 3044992 3047182 Dod07g0231 07 3044992 3047182 ECH
Dod01g2863 01 69065379 69067627 Dod07g0231 07 3044992 3047182 PCT