Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0219 ATGAAGGTGATCGCTGCGTATTTGCTTGCCGTGCTTGGAGGCAACACCGACCCTTCTTCCCATGTCATCAAGGACATCCTTGCATCTGTTGGAGCAGAAGCAGAGGATGTTATGATTGAACTGCTTCTGTCTGAGGTTAAGGGTAAGGATATAGCTGAGGTTATTGCCGCTGGCAGGGAAAAGTTGGCTTCCGTGCCTTGTGGTGGCGGTGCTGCCATTGCAGTTTCTGCTGCTCCTGGTGGAGGAAGCGGCGGTGCTGCTGCTCCTGCAGCTGCTGAGGCGAAGAAGGAAGAAAAGGTGGAGGAGAAGGAGGAATCTGATGATGATATGGGATTCAGTCTCTTCGATTAA 351 0.5185 MKVIAAYLLAVLGGNTDPSSHVIKDILASVGAEAEDVMIELLLSEVKGKDIAEVIAAGREKLASVPCGGGAAIAVSAAPGGGSGGAAAPAAAEAKKEEKVEEKEESDDDMGFSLFD* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0219 116 CDD Ribosomal_P2 1 116 IPR044076 GO:0002182|GO:0003735|GO:0022625
Dod07g0219 116 Hamap 50S ribosomal protein L12 [rpl12]. 2 116 IPR027534 GO:0003735|GO:0005840|GO:0006414
Dod07g0219 116 Pfam 60s Acidic ribosomal protein 18 115 - -
Dod07g0219 116 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 116 IPR044076 GO:0002182|GO:0003735|GO:0022625
Dod07g0219 116 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2-1 1 116 - -
Dod07g0219 116 MobiDBLite consensus disorder prediction 80 116 - -
Dod07g0219 116 Gene3D - 1 59 IPR038716 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0219 Dod-Chr7 2779184 2780685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0219 1 116 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 62.069 5.24e-30 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0219 K02943 - egr:104452151 126.716