Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0213 ATGGACTTGCATCTGAAGCAACGTAGAAACCAGCATGAGTCAGAGCAACAACATTCTACAAAGATGCCAAGGTTTCTTCTACCTGAACCCCATCAGCAGCAACAATCACCTGCCTCAGTTCTCCCTTTGTTTGTATCTGAACCAAACAGCAAAGTCAGCAGCACCTTGTTGTCAGCATCTTCTGATTCAGCATTAGATAGAAGGGTTGGGAGCTATTTCAGCATTGCACAGTGGCAAGAGCTTGAGTTGCAGACTTTGATATTCAGGTTCATGTTGGCAGGTGCTGCTGTTCCTCCTGAGCTGCTACAACCAATCAAGAAAAGCCTTCTCCATTCCCCTCCATGTTTTCTCAATCACCCACTTCAGCATGTTCACCCTGCTTTGTTGCAGTCAAGCTATTGGGGAAGAGCAGCCATGGATCCAGAGGCTGGCCGGTGCCGGAGAACTGATGGCAAGAAGTGGCGGTGCTCAAGGGAAGTGGTGGCGGGTCAGAAGTATTGTGAGCACCACATGCATCGTGGTAGAAACCGTTCAAGAAAGCCTGTGGAACTACTTATGGCAACCAGTGTCACTGGTGGATCTCTTGCTTCTACATCATCCTCTTATGCACGTTCCTATGGAACCAAGAATGATAGCAAAAGATTGTTGGAAAACCAAGACCATGTAAATGGGGATGGCAAATCTGGTGGCCATATCCTAAGGCCTTTCTTCAACAATTGGCCGCGATCATCGCAAGATCCTGACAACGGCGATAGCAACGCTGGCAGGATCAACCCGGCAACACATCTCTCTATGCCAAAGCCAGGAAGTACTAGCTCGGATGTGTCATTGAAATTGTTCACCGGCCATGCAGAATCCAAGAAATGGTAA 870 0.4805 MDLHLKQRRNQHESEQQHSTKMPRFLLPEPHQQQQSPASVLPLFVSEPNSKVSSTLLSASSDSALDRRVGSYFSIAQWQELELQTLIFRFMLAGAAVPPELLQPIKKSLLHSPPCFLNHPLQHVHPALLQSSYWGRAAMDPEAGRCRRTDGKKWRCSREVVAGQKYCEHHMHRGRNRSRKPVELLMATSVTGGSLASTSSSYARSYGTKNDSKRLLENQDHVNGDGKSGGHILRPFFNNWPRSSQDPDNGDSNAGRINPATHLSMPKPGSTSSDVSLKLFTGHAESKKW* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0213 289 Pfam QLQ 73 105 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dod07g0213 289 MobiDBLite consensus disorder prediction 238 277 - -
Dod07g0213 289 PANTHER GROWTH-REGULATING FACTOR 3 207 287 - -
Dod07g0213 289 MobiDBLite consensus disorder prediction 1 37 - -
Dod07g0213 289 MobiDBLite consensus disorder prediction 219 277 - -
Dod07g0213 289 MobiDBLite consensus disorder prediction 1 19 - -
Dod07g0213 289 PANTHER - 8 203 IPR031137 GO:0005634|GO:0006351|GO:0032502
Dod07g0213 289 PANTHER GROWTH-REGULATING FACTOR 3 8 203 - -
Dod07g0213 289 ProSiteProfiles WRC domain profile. 140 184 IPR014977 -
Dod07g0213 289 Pfam WRC 141 183 IPR014977 -
Dod07g0213 289 PANTHER - 207 287 IPR031137 GO:0005634|GO:0006351|GO:0032502
Dod07g0213 289 ProSiteProfiles QLQ domain profile. 72 107 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dod07g0213 289 SMART QLQ_2 71 107 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0213 Dod-Chr7 2728087 2731346 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0213 1 282 GRF Transcription Factor Family AT3G52910 46.462 8.72e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Dod07g0213 WRC 6.9e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0213 - - gmx:100816436 336.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2844 01 68727943 68730822 Dod07g0213 07 2728087 2731346 PCT