Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0211 ATGCAGAAACGAAGGGCAGGGAGGAAGAAATTCCATGAGACTCGCCACCCTATCTACAAAGGTGTGAGGCAAAGGAATGGGAAATGGGTGTGTGAGCTTAGGCAACCAAACAACAAAGCTAGGGTATGGCTTGGAACTTTTGCTCACCCTCAAATGGCAGCTAAAGCCTATGATGTTGCTGCTTTGGCTTTCAGGGGTGAGAGTGCTTCCTTGAACTTCCCTCAAGCCGCCACCACGTTGCCGCGGCTTAGCAGGGAAACCAATTCCATAAAGACTATTCAGATCGCGGCACTGCAAGCGGCGGAGAAGCACTTCTCATCATGCAAGGAGGAGCTTGACGAAGCCAAAGATATTGACATCACTGGCAATGATAATAATAATAATTTTTCTTCTTCTCATGATGATGAGTTTCCTTTGGATTGCAGCTCTGGTTCTTGCATATCGGATGGGTCCAGTATTGAAAGAGAAGATTCTGGAAGCTTCTATTGGGATGAGGGGGAGGTGTTTGACATGCCAGGGTTGATGAACAGCATGGCAGAAGGGCTGATTATAACACCACCGGCTCTGCAAAGAGGGTTCAGTTGGGTTGGTGGGGAAACTGCAGTGGACTTGACTCTCTGGGGAGACTGA 630 0.4841 MQKRRAGRKKFHETRHPIYKGVRQRNGKWVCELRQPNNKARVWLGTFAHPQMAAKAYDVAALAFRGESASLNFPQAATTLPRLSRETNSIKTIQIAALQAAEKHFSSCKEELDEAKDIDITGNDNNNNFSSSHDDEFPLDCSSGSCISDGSSIEREDSGSFYWDEGEVFDMPGLMNSMAEGLIITPPALQRGFSWVGGETAVDLTLWGD* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0211 209 CDD AP2 17 76 IPR001471 GO:0003700|GO:0006355
Dod07g0211 209 PRINTS Ethylene responsive element binding protein signature 56 76 IPR001471 GO:0003700|GO:0006355
Dod07g0211 209 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Dod07g0211 209 PANTHER CBF/DREB1 TRANSCRIPTION FACTOR 7 207 - -
Dod07g0211 209 ProSiteProfiles AP2/ERF domain profile. 18 74 IPR001471 GO:0003700|GO:0006355
Dod07g0211 209 SUPERFAMILY DNA-binding domain 18 75 IPR016177 GO:0003677
Dod07g0211 209 Coils Coil 98 118 - -
Dod07g0211 209 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 7 207 - -
Dod07g0211 209 SMART rav1_2 18 80 IPR001471 GO:0003700|GO:0006355
Dod07g0211 209 Gene3D AP2/ERF domain 18 76 IPR036955 GO:0003700|GO:0006355
Dod07g0211 209 Pfam AP2 domain 17 66 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0211 Dod-Chr7 2685661 2686581 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0211 3 207 AP2-EREBP Transcription Factor Family AT5G51990 41.627 6.64e-42 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod07g0211 AP2 1.8e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0211 - - gmx:100778541 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0211 07 2685661 2686581 Dod07g0211 07 2685661 2686581 ECH
Dod07g0211 07 2685661 2686581 Dod01g2839 01 68619945 68620870 PCT