Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0210 ATGCGTTCGAGTTCTTCTTCTTCTGATTCTGGGGCGGGGCGTCACCCGGCGTACCGCGGGGTGAGGCGTAGGAGTAGTGGGAAATGGGTGTCCGAGATTAGGGAGCCAAGGAAGCCAAACAGGATTTGGTTAGGGACATTCCCTACACCAGAAATGGCTGCGGTTGCATATGATGTTGCTGCCCTTGCCCTTAAGGGCAAGGATGCTGAGTTGAACTTCCCTGACTCAGCTTCTTCGCTTCCTGTTCCTGCTTCCTTGTCCGCACGTGACATTCAGCTCGCTGCAGCCAGTGCTGCTGCTGCTGCTGGAGCAGCAAAAGATGCTTTGTCTAATGCTGAGGGAAGCCAATCATCAAGGAATTATAATAGTAATTATAATTATAATAATGCTTCTTCTTCTTCTTCTTCTTCAGTGGCACAGGATTATGTTGATGAGGATTTGATCTTTGATATGCCTAATGTTCTGGTCAATATGGCACAAGGAATGCTTCTTAGTCCTCCTCCTTTTGACATTGGTGGTGGCAGTGGACAAGCAAGTGCCCCGGGAAACATGGATGATGATGATGATGATGAGCCAAGCCTCTGGAATTTCCCTTAA 597 0.4841 MRSSSSSSDSGAGRHPAYRGVRRRSSGKWVSEIREPRKPNRIWLGTFPTPEMAAVAYDVAALALKGKDAELNFPDSASSLPVPASLSARDIQLAAASAAAAAGAAKDALSNAEGSQSSRNYNSNYNYNNASSSSSSSVAQDYVDEDLIFDMPNVLVNMAQGMLLSPPPFDIGGGSGQASAPGNMDDDDDDEPSLWNFP* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0210 198 MobiDBLite consensus disorder prediction 183 198 - -
Dod07g0210 198 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF024 4 198 - -
Dod07g0210 198 MobiDBLite consensus disorder prediction 166 198 - -
Dod07g0210 198 CDD AP2 18 76 IPR001471 GO:0003700|GO:0006355
Dod07g0210 198 MobiDBLite consensus disorder prediction 1 31 - -
Dod07g0210 198 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 4 198 - -
Dod07g0210 198 SUPERFAMILY DNA-binding domain 17 76 IPR016177 GO:0003677
Dod07g0210 198 Pfam AP2 domain 16 66 IPR001471 GO:0003700|GO:0006355
Dod07g0210 198 ProSiteProfiles AP2/ERF domain profile. 17 74 IPR001471 GO:0003700|GO:0006355
Dod07g0210 198 PRINTS Ethylene responsive element binding protein signature 18 29 IPR001471 GO:0003700|GO:0006355
Dod07g0210 198 PRINTS Ethylene responsive element binding protein signature 56 76 IPR001471 GO:0003700|GO:0006355
Dod07g0210 198 SMART rav1_2 17 80 IPR001471 GO:0003700|GO:0006355
Dod07g0210 198 Gene3D AP2/ERF domain 17 75 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0210 Dod-Chr7 2662489 2663182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0210 6 198 AP2-EREBP Transcription Factor Family AT2G36450 60.204 1.55e-55 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod07g0210 AP2 3.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0210 - - pvu:PHAVU_007G222600g 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0210 07 2662489 2663182 Dod07g0210 07 2662489 2663182 ECH
Dod01g2839 01 68619945 68620870 Dod07g0210 07 2662489 2663182 PCT