Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0208 ATGCCCTACAGTCCCATGGATGATATGGAAGATCATCATCAACATCAACATGAGCAACACCAACAACACTATGGTTTAATAACCGATCTAAGACAATTAATGAATGGTCCTCCAAGTATGCATCAACAACCACAACTACTCACGGCTGAGCTTTTTCCCGGTCATCACCGGAACCTTCCACCGCCGTTGGCCACCACCAGTAACCATCATCACCAACACTATGATATGATGATGTTTGGCTGTGACATGTTGCCACGTGGCCTTCATCATCATCATCATGAGTTTGCTTCCACAGATTCCGCTGGTGGGGGTGGTGGCGGTGGCGGTGGCGGCATCACTACTACTAGTGTTTCAACTCCTCCACTTAGTGGCTTAGAAGCTGAGGCTGCAGGGTGCATCGGTGGGGATGCATCCACTGGAAGATGGCCCAGGCAGGAGACTCTTACCCTTCTTGAGATCAGATCTCGGCTTGACCCTAAATTCAAAGAGGCTAATCAAAAGGGACCCTTGTGGGAAGAAGTCTCTAGGATCATGTCTGAAGAACATGGATACCAAAGGAGTGGGAAAAAGTGCAGGGAGAAGTTTGAGAACCTATACAAATATTACAAGAAGACAAAGGAAGGAAAAGCAGGAAGACAAGATGGGAAGCATTACAGGTTCTTTCGTCAGCTTGAAGCCTTATATGGAGAAAACAGCAACATGTCTTCAGCCCCAGAAACAAGTTTTGGTGTCAACCTTGGTTTCAACACAAGTAGCCATTTCCCTTCCCAAACAAACCAAGAAGCAATGTTTCAGTCTCACAATAAGCATAATTGTGACACCATAAGCCTCACTAACTCCACTGAATTTGACACATCATCATCTGATCATAACAGCATTGAGGGGCTAATAATGGAGAACATTGATGATTCCATGGAGAAGGGGAGGAAAAAGAGGAAGAGTGGAGGGAGGAGTTGGAAGGTGAAGATCAAAGACTTCATTGATTCACAGATGAGGAAGCTTGTGGAGAAGCAAGAGGAATGGTTGCACAAGCTAGTGAAGACTTTGGAAGAGAAGGAGAATGAGAGGGTGTTGAGAGAGGAAGAGTGGAGGAAGCAAGAGGCAATAAGGTTGGAAAAGGAGCACAAGTTTTGGGCCAAAGAGAGGGCATGGATTGAAGCAAGGGATGCTGCTCTAATGGGTGCTTTGCAGAAGCTAATAGGAAGGGATGAAATCAAGGCTGAAGAAGGTCCTCATGAGGGTGTGATGGCACCTCATGAAATCCGAAACCAAAACCAGAATGAAGATGGAAATGAAATAGTACTACATAGCAATGTTATTGGAGGTGCTGATGATTGCTGGCAAGAATCTGAGATTACTAGGCTTCAACAGTTCACACAAAGTGGGTATTCAGAAGAGGTTAATTGGGAGGAAGTGGCAAACAAAATGGCTTGTTTTGGATATGAAAGGACTGCTTTGATGTGCAAAGAGAAATGGGAAAGTATCAACAACTTTGATGCCATGGAAGGAAACATTAAGGAGCTCAAGGGAAACTCAAGAAGTCTTTTTTACTTTGAGAACAATGTTCAATATTCCCTATACAATAGTAATCAAGGGAGTGCCTATAGTGATGTCAATGATCAAAGGCATAATACAAACAAATGA 1644 0.4404 MPYSPMDDMEDHHQHQHEQHQQHYGLITDLRQLMNGPPSMHQQPQLLTAELFPGHHRNLPPPLATTSNHHHQHYDMMMFGCDMLPRGLHHHHHEFASTDSAGGGGGGGGGGITTTSVSTPPLSGLEAEAAGCIGGDASTGRWPRQETLTLLEIRSRLDPKFKEANQKGPLWEEVSRIMSEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGENSNMSSAPETSFGVNLGFNTSSHFPSQTNQEAMFQSHNKHNCDTISLTNSTEFDTSSSDHNSIEGLIMENIDDSMEKGRKKRKSGGRSWKVKIKDFIDSQMRKLVEKQEEWLHKLVKTLEEKENERVLREEEWRKQEAIRLEKEHKFWAKERAWIEARDAALMGALQKLIGRDEIKAEEGPHEGVMAPHEIRNQNQNEDGNEIVLHSNVIGGADDCWQESEITRLQQFTQSGYSEEVNWEEVANKMACFGYERTALMCKEKWESINNFDAMEGNIKELKGNSRSLFYFENNVQYSLYNSNQGSAYSDVNDQRHNTNK* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0208 547 ProSiteProfiles Myb-like domain profile. 134 199 IPR001005 -
Dod07g0208 547 PANTHER - 39 536 - -
Dod07g0208 547 ProSiteProfiles Myb-like domain profile. 447 496 IPR001005 -
Dod07g0208 547 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 39 536 - -
Dod07g0208 547 Coils Coil 335 362 - -
Dod07g0208 547 SMART sant 359 498 IPR001005 -
Dod07g0208 547 SMART sant 138 201 IPR001005 -
Dod07g0208 547 MobiDBLite consensus disorder prediction 94 119 - -
Dod07g0208 547 Pfam Myb/SANT-like DNA-binding domain 445 503 IPR044822 -
Dod07g0208 547 Pfam Myb/SANT-like DNA-binding domain 141 227 IPR044822 -
Dod07g0208 547 Gene3D - 446 498 - -
Dod07g0208 547 Gene3D - 142 204 - -
Dod07g0208 547 MobiDBLite consensus disorder prediction 1 23 - -
Dod07g0208 547 CDD GT1 141 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0208 Dod-Chr7 2621089 2624662 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0208 17 537 Trihelix Transcription Factor Family AT5G03680 44.365 3.06e-122 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dod07g0208 Myb_DNA-bind_4 9.6e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0208 - - aprc:113870891 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0208 07 2621089 2624662 Dod07g0208 07 2621089 2624662 ECH
Dod01g2838 01 68591032 68594908 Dod07g0208 07 2621089 2624662 PCT