Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0200 ATGGCACTTGTCTGCCACCGCCATGGACGTAGCTCTACAGTGTCCACCCTCCACCGCCTTTGCTTCCTTTTAAGCTTTTGTTCCGACCCCATTTCCCCACTCCATTCTTCCACACACCCCTCCATTACAGTGTTTCTTGTGTTCTTCCTTGGAATCACTATGAACCCAAATGATGAACCAAAGGGTAAAGCTCCAGCACCTGAAGAACCCTCTTGCTGTTCTCCTCCTCCTCCTACAACAGGGCTCTCTCCCTTGGAGTTTGGTTCTGAAGCATTATCATCAGCTTTTGATGACACTTTTGATATCCTTGATGATACCCCTTTGATGGAGTTTGAAGCATTCTCAACAGCTATGGACCAACCACCACAACCTCTACCACCAGCAGCAACAACCTCCATCACAGGTTTGGAGAATCTTGGTGGTGGTGTACCAATGCCTCAGCCATTGGAGAGCTTGCAAGGGAACCCGGTTCCACCATTTCTGAGCAAAATCTTCGACCTTGTGGATGACCCTTCTTTGGATCCTATCATCTCTTGGGCCTCCACTGGTGCTAGCTTCGTGGTTTGGGACCCTATGGAGTTTTCAAGGCTCGTGTTGCCCCGGAATTTCAAGCACAACAACTTCTCCAGTTTTGTTCGGCAGCTGAATACTTATGGATTCCGCAAGATTGACACAGACAAGTGGGAGTTTTTCAACGAAGCTTTCCAGCGAGGGAAGAGACATTTACTGAGGAACATACAAAGGCGCAGGTCAACTCAATCTCAGCAGGTTGGTAGCTACATTGGTGGGCCCTCTACTGATGCAGGGAAACCTGGACTTGAGGTTGAGATAGAGAAACTGAAGAAGGATAGGGGCATGTTGATGCAAGAGGTGGTTGATTTGCAGCAACAACAGCGAAGAACGGTTCACCATGCAGGAGAAGTGAACCAGAGGCTCCAGTCTGCAGAGCAAAGGCAGAAACAAATGGTTTCCTTCTTGGCCAAGTTATTTCAGAACCCGGCCTTCTTGGCCCGCCTTAGGCACAAGAAGGAACAAAGAGAGATAGGCTCTCCAAGAGTGAGAAGGAAGTTTGTCAAGCAGCACCAACATGAAGCAGGAACATCAGAAACTCTCAGGGAAGGGAAGATAGTGAGGTACCAACCTGATTGGGGAAATCTAACCATCTCTTCTGAACTAAATCCAGTTTCCATTGAACAGTCTCCTCACTACCTTTCACAGGATTTGGCAAGAGAAATGAGTGTAGGTGCAGAAAATCTGACTTCACAAATGGAAAACGTTGTACCAGACAAATTGGATGTGGTGCATGAGGCTATGCCGACCCCAGGAATCATTAGAGAAGGATCATCGAGCTTTGGACTCGAAGACCCCCTTTCCTCCAAAGGGAAGAATGTCTTCAGCCCAAATCAAGATGTTCTTCCAGAGTGTTTTGTTTCCTTCCCAGAGGAATTGTCCAAGGAGAAAGGCTTTCCAGTGTTCCCTCCTCTTGGGACTGAAAGCATTATCAAGCAAGAAGGTAAATGGGAACCTGACTTCAATGTTAGTGGTGCTGCTTCAAGCTGTGGGAATGAGCTCTGGGGTAATCCTATCAACTGTGAAGTACCAGAATTTGGAGGCATACGTGGATTGTCAGATATATGGGATATTGGCTCAGGAAGCTTTGGTATTGATGAGTGGCCAGCTGATGAACCTCCCCTTGATGATGAAGAGGAGGGTCAAGCTGGTCAGCCAAAAGATGATAGACCTTGA 1746 0.4754 MALVCHRHGRSSTVSTLHRLCFLLSFCSDPISPLHSSTHPSITVFLVFFLGITMNPNDEPKGKAPAPEEPSCCSPPPPTTGLSPLEFGSEALSSAFDDTFDILDDTPLMEFEAFSTAMDQPPQPLPPAATTSITGLENLGGGVPMPQPLESLQGNPVPPFLSKIFDLVDDPSLDPIISWASTGASFVVWDPMEFSRLVLPRNFKHNNFSSFVRQLNTYGFRKIDTDKWEFFNEAFQRGKRHLLRNIQRRRSTQSQQVGSYIGGPSTDAGKPGLEVEIEKLKKDRGMLMQEVVDLQQQQRRTVHHAGEVNQRLQSAEQRQKQMVSFLAKLFQNPAFLARLRHKKEQREIGSPRVRRKFVKQHQHEAGTSETLREGKIVRYQPDWGNLTISSELNPVSIEQSPHYLSQDLAREMSVGAENLTSQMENVVPDKLDVVHEAMPTPGIIREGSSSFGLEDPLSSKGKNVFSPNQDVLPECFVSFPEELSKEKGFPVFPPLGTESIIKQEGKWEPDFNVSGAASSCGNELWGNPINCEVPEFGGIRGLSDIWDIGSGSFGIDEWPADEPPLDDEEEGQAGQPKDDRP* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0200 581 ProSitePatterns HSF-type DNA-binding domain signature. 199 223 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod07g0200 581 Gene3D - 153 250 IPR036388 -
Dod07g0200 581 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-3 147 578 - -
Dod07g0200 581 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 147 578 IPR027725 -
Dod07g0200 581 MobiDBLite consensus disorder prediction 553 581 - -
Dod07g0200 581 MobiDBLite consensus disorder prediction 59 80 - -
Dod07g0200 581 PRINTS Heat shock factor (HSF) domain signature 211 223 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod07g0200 581 PRINTS Heat shock factor (HSF) domain signature 198 210 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod07g0200 581 PRINTS Heat shock factor (HSF) domain signature 160 183 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod07g0200 581 Coils Coil 277 297 - -
Dod07g0200 581 Pfam HSF-type DNA-binding 160 249 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod07g0200 581 SMART hsfneu3 156 249 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod07g0200 581 SUPERFAMILY "Winged helix" DNA-binding domain 155 249 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0200 Dod-Chr7 2573976 2576816 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0200 142 537 HSF AT5G03720 46.782 3.11e-99 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Dod07g0200 HSF_DNA-bind 6.2e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0200 K09419 - gmx:100780835 585.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0200 07 2573976 2576816 Dod07g0200 07 2573976 2576816 ECH