Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0195 ATGGAAGAAGAAACTGTTAACAACAACACCACCAACACCAACACCAATGTTTCTGCATCAGTGTCACCCCTTTCAGCCCCACAACCACAACCAGTGATGATGAACATGAACATGATGAATGGTGGTGGAGTCACAGAAACAACAGCATCAGCAACAACAACAGCAGTGTCTTTAGGTGCAGCAACAACAATGGCTGCAACAACAACACCACCACCTGTAGCTGGAGGGAGCTTAGACTTGTTTGGTGAGAAGAAGAAGAAGAAGAGAGGGAGGCCAAGGAAATATGATTCAGATGGGAACTTGAGGCTAACATATCAGAATGCAACACCACCATCATTGCCATTGCCATTACCATCATCACAAACACAAGGCTTCACCTTGTCACAAACTTCACCACCTTTTTCTTCTGAGTTCTTCTCTTCCAAAAGGGGTCGTGGCAGGTCAAGTAGTTCCCATTTTCTTGCTTCTTTTGGTGAGGCGTTTGCAATCACTGCTGGTGGGGATTTTGCGCCACATGTTGTGACTGTTCATACTGGAGAGGATGTTGCTGGAAAGATTCTGTCATTTGCCCAGAAGAGTCCAAGAGGATTATGTGTTCTTTCTGCCAATGGAGCTATCTCTAATGTTACCTTACGCCAACCTGGTTCTTCTGGTGGGCTATTGACTTATGAGGGGCGGTTTGAGATTTTATCTTTGTCTGGATCATACACAATCTCTGACAACAATGGCATGAGAAGTAGGACTGGTGGATTGAGTGTCTCACTAGCAGGTCCTGATGGTCGAGTGATTGGAGGTGGAGTTGCTGGTCTGTTGACTGCTGCTAGCCCTATTCAACTTGTATTGGGAAGCTTCATTCCAAATGGTTACAAGCCTCATAAAAGGAAGTACCACCGTGAGCATACAGTGGCCTCACCTATTTCAGGTGGTCCAGACACAGTCACAGCAGCAAGGCCTATATCACAAGCAAATCCTGATGGCGAGAATAACTTTCTGATATCAACATCTCAGCTACCTGAACAAAGCCAGAGAGAACCTGTTGGTGTTACAAGTGATGAAAAGCTGAACCTAGATGCCTCACCTCATGATGCTGCTGCTACTTGGAATGGTTCTGAAGAGTTTTCAGATCAGAGAATATCCCCAGACATCAATATATCTTTGCCTGATGAATAG 1170 0.4521 MEEETVNNNTTNTNTNVSASVSPLSAPQPQPVMMNMNMMNGGGVTETTASATTTAVSLGAATTMAATTTPPPVAGGSLDLFGEKKKKKRGRPRKYDSDGNLRLTYQNATPPSLPLPLPSSQTQGFTLSQTSPPFSSEFFSSKRGRGRSSSSHFLASFGEAFAITAGGDFAPHVVTVHTGEDVAGKILSFAQKSPRGLCVLSANGAISNVTLRQPGSSGGLLTYEGRFEILSLSGSYTISDNNGMRSRTGGLSVSLAGPDGRVIGGGVAGLLTAASPIQLVLGSFIPNGYKPHKRKYHREHTVASPISGGPDTVTAARPISQANPDGENNFLISTSQLPEQSQREPVGVTSDEKLNLDASPHDAAATWNGSEEFSDQRISPDINISLPDE* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0195 389 ProSiteProfiles PPC domain profile profile. 166 309 IPR005175 -
Dod07g0195 389 SUPERFAMILY AF0104/ALDC/Ptd012-like 168 290 - -
Dod07g0195 389 CDD DUF296 171 284 IPR005175 -
Dod07g0195 389 Gene3D - 171 303 - -
Dod07g0195 389 MobiDBLite consensus disorder prediction 1 26 - -
Dod07g0195 389 SMART AT_hook_2 86 98 IPR017956 GO:0003677
Dod07g0195 389 SMART AT_hook_2 142 154 IPR017956 GO:0003677
Dod07g0195 389 MobiDBLite consensus disorder prediction 67 131 - -
Dod07g0195 389 MobiDBLite consensus disorder prediction 362 389 - -
Dod07g0195 389 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 12 388 - -
Dod07g0195 389 Pfam Plants and Prokaryotes Conserved (PCC) domain 171 284 IPR005175 -
Dod07g0195 389 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 12 388 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0195 Dod-Chr7 2470409 2474708 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0195 86 353 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 47.163 7.31e-68 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0195 - - gmx:100779227 403.29