Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0189 ATGCCATTAACCTTATTCATTATCCCCATCATTCTCTTTACACCACCATCTCCAACATTGAGCCTCCACCACCACAATGACACACATGCACTCACCCTCTTCCGCCTCCAAGCCGACCTCCACGGTCACCTCCTCCCAAACTGGACTGGCGGCGACGCCTGCTCCGCCGGGTGGCGCGGCGTTTCTTGCTCCCCAAACAACCGTGTCACCACACTTTCCCTCTCTTCCCTCAACCTAAGAGGACCCTTAACTCCACTCTCCTTCCTCACACACCTTCGGTTCCTTGACCTACACGACAACCGTTTAAATGGCACCCTTACATCTTTGCTCTCCAACTGCACCAACCTCATGCTCCTCTACCTCTCTGACAACGATCTCTCCGGTGAGATACCACCGGAGATATCGGCTGTTAAGAGCCTCCTCCGCCTCGACCTCTCCGCCAACAACTTGGGTGGCAAGGTTCCAAAGGAACTTTCCCAATTGACAAAGCTTCTCACATTGAGGCTCCAAGACAACGTGCTCACTGGCTTCATACCTGACCTTTCAGCTTCCATGGAGAGCCTGGAAGAGCTTAACATGACCAACAATGAGTTCTATGGTCGGTTACCGGATAACATGATCAAGAAGTTCGGTGCTGAAAGCTTCAATGGCAATGAGGGTCTATGTGGTGCAACCTCATTACCGGTTTGTTCATTCACTCATGAGAATTCCCCTCCTTATGGTGATGGTGGTGATGATGATCATGATGATGATCTTGGCCAAACGGTTCCTTCAAATCCTAGCTCTATGCCAGAGACAAGTGTGGTTGCAAGGCCAGGAACAAAACAACACCACAAGGGGTTGAGCCCTGGTGCCATTGTGGCAATTGTGGTGGCAAATTGTGTGGCTTTGGTGGTGGTGACTTCATTTCTAGTTGCTCAATGTTGTGGTAGAGAAAGAGGGTCTAATTCCTTGGTGGATAGTGACGAGAGTGGGAAGAGGAAGAGTAGTGTGAGTAGTGGCTATGCAAGGAACCGTGGTCCAGGAAGAATCCCATTAGATTGGACTACAAGAATAAGCTTGGTATTAGGGGCAGCTAGAGGCCTTGCTCGGATTCATGCAGAGTACAGTTCAGCTAAAGTGCCTCATGGGAATGTGAAATCTTCCAATGTGCTTCTTGACAAGAATGGTGTTGCATGCATCTCTGACTTTGGTTTGTCACTGCTGCTGAACCCTGTCCATGCCATTGCAAGGTTGGGAGGGTACAAGGCTCCTGAACAGGCAGAACAAAAGAGGCTGTCTCAGCAGGCAGATGTGTACAGTTTTGGGGTGTTGCTGTTGGAAGTCCTCACAGGGAGGGCCCCCTCATCGCATTACCCTTCACCGGCTCGCCCCTGCAGCGTTGATGAAGAGGAACAACATGCTGTGGATCTTCCCAAATGGGTTCAATCTGTTGTGAAGGAAGAGTGGACAGGAGAGGTGTTTGATCAAGAGCTCTTGAGGTACAAGAACATTGAGGAAGAGCTTGTGTCAATGCTGCATGTTGGGTTGGCTTGTGTTGTGCCGCAGCCAGAGAAGAGGCCAACCATGGCAGAAGTTGCCAAGATGATTGAGGAAATCAGGGTGGAGCAATCCCCTCTTGGAGAGGACTATGACGAATCACGCAATTCGCTTTCACCTTCCCTTCCTACCACAGAAGATGGTCTAGCTTAA 1692 0.5024 MPLTLFIIPIILFTPPSPTLSLHHHNDTHALTLFRLQADLHGHLLPNWTGGDACSAGWRGVSCSPNNRVTTLSLSSLNLRGPLTPLSFLTHLRFLDLHDNRLNGTLTSLLSNCTNLMLLYLSDNDLSGEIPPEISAVKSLLRLDLSANNLGGKVPKELSQLTKLLTLRLQDNVLTGFIPDLSASMESLEELNMTNNEFYGRLPDNMIKKFGAESFNGNEGLCGATSLPVCSFTHENSPPYGDGGDDDHDDDLGQTVPSNPSSMPETSVVARPGTKQHHKGLSPGAIVAIVVANCVALVVVTSFLVAQCCGRERGSNSLVDSDESGKRKSSVSSGYARNRGPGRIPLDWTTRISLVLGAARGLARIHAEYSSAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVHAIARLGGYKAPEQAEQKRLSQQADVYSFGVLLLEVLTGRAPSSHYPSPARPCSVDEEEQHAVDLPKWVQSVVKEEWTGEVFDQELLRYKNIEEELVSMLHVGLACVVPQPEKRPTMAEVAKMIEEIRVEQSPLGEDYDESRNSLSPSLPTTEDGLA* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0189 563 SUPERFAMILY Protein kinase-like (PK-like) 341 531 IPR011009 -
Dod07g0189 563 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Dod07g0189 563 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 5 335 - -
Dod07g0189 563 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 337 554 - -
Dod07g0189 563 MobiDBLite consensus disorder prediction 233 278 - -
Dod07g0189 563 PANTHER LRR RECEPTOR-LIKE KINASE 5 335 - -
Dod07g0189 563 PANTHER LRR RECEPTOR-LIKE KINASE 337 554 - -
Dod07g0189 563 MobiDBLite consensus disorder prediction 537 563 - -
Dod07g0189 563 Gene3D Ribonuclease Inhibitor 143 230 IPR032675 -
Dod07g0189 563 Pfam Protein kinase domain 355 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0189 563 Gene3D Transferase(Phosphotransferase) domain 1 333 551 - -
Dod07g0189 563 Gene3D Ribonuclease Inhibitor 26 140 IPR032675 -
Dod07g0189 563 ProSiteProfiles Protein kinase domain profile. 188 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0189 563 SUPERFAMILY L domain-like 25 207 - -
Dod07g0189 563 MobiDBLite consensus disorder prediction 254 269 - -
Dod07g0189 563 MobiDBLite consensus disorder prediction 315 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0189 Dod-Chr7 2428587 2431429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0189 338 559 Receptor kinase-like Gene Family AT2G36570 81.057 1.19e-120 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dod07g0189 Pkinase 1.7e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0189 - - fve:101311589 406.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0189 07 2428587 2431429 Dod07g0189 07 2428587 2431429 ECH
Dod01g2817 01 68338914 68341863 Dod07g0189 07 2428587 2431429 PCT