Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0184 ATGGATTGGAATGGGAGCACAAGACCCTTTGTTCCTCCTCGAGCTGAGTCTTCCTTGAGCTTCCTCTACAACTATAACTACTCCCCATATCCAGGGATGGAAGTGAAACAACAAGCATTGGATTTGGTGGAGACAGGTCCACCATCATCAATGGAGAAAATGAGCAGTGGGTCCCAGCAAGAGAAGAAGAAGAGGTTAACAGGTGACCAGCTTGACTCACTGGAGAGGAGTTTCCAGAAGGAGATAAAGTTGGACCCTGATAGGAAGATGAGGCTTTCAAGGGAGTTAGGGTTGCAGCCTCGCCAGATTGCTGTTTGGTTCCAAAACAGGCGTGCAAGGTGGAAGGCCAAGCAGCTTGAGAGCTTGTATGATTCACTTAAACAGGAATTTGATGTCATAGCCAAGGAAAAGCAGAAGCTGCAGGAAGAGGTTATGAAGTTGAAGGCTATGCTGAGAGAACAAGCTTCAAGGACACAGATATCAGCAGGTTACACAGAAATCTCTGGGGAAGAAACAGTAGAGAGCACTTCAGAGGCTTTGCGTTGCTCCAACAAGCAAAGAGGAACAATGGTTGTTGTTCATCATAATCAACAACAGCAGCAGCAGAATGTTGCAGATCAGGGAAACTGCTCCTTCACTGTGGAAGGCTACAACACAGTTCCAGTGTTGCCCTACTGGGCTGGTGTTCCTTATTACCCTTAA 702 0.4687 MDWNGSTRPFVPPRAESSLSFLYNYNYSPYPGMEVKQQALDLVETGPPSSMEKMSSGSQQEKKKRLTGDQLDSLERSFQKEIKLDPDRKMRLSRELGLQPRQIAVWFQNRRARWKAKQLESLYDSLKQEFDVIAKEKQKLQEEVMKLKAMLREQASRTQISAGYTEISGEETVESTSEALRCSNKQRGTMVVVHHNQQQQQQNVADQGNCSFTVEGYNTVPVLPYWAGVPYYP* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0184 233 Gene3D - 54 125 - -
Dod07g0184 233 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 1 224 - -
Dod07g0184 233 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 224 IPR045224 GO:0003700
Dod07g0184 233 SMART HOX_1 60 121 IPR001356 GO:0003677
Dod07g0184 233 PRINTS Lambda-repressor HTH signature 88 97 IPR000047 GO:0003677
Dod07g0184 233 PRINTS Lambda-repressor HTH signature 97 113 IPR000047 GO:0003677
Dod07g0184 233 ProSiteProfiles 'Homeobox' domain profile. 57 117 IPR001356 GO:0003677
Dod07g0184 233 ProSitePatterns 'Homeobox' domain signature. 92 115 IPR017970 GO:0000981|GO:0006355
Dod07g0184 233 Coils Coil 109 157 - -
Dod07g0184 233 CDD homeodomain 62 118 IPR001356 GO:0003677
Dod07g0184 233 Pfam Homeodomain 62 115 IPR001356 GO:0003677
Dod07g0184 233 SUPERFAMILY Homeodomain-like 46 119 IPR009057 -
Dod07g0184 233 Pfam Homeobox associated leucine zipper 117 151 IPR003106 GO:0006355|GO:0043565
Dod07g0184 233 MobiDBLite consensus disorder prediction 45 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0184 Dod-Chr7 2366306 2368590 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0184 1 147 Homeobox Transcription Factor Family AT5G03790 52.727 2.50e-46 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Dod07g0184 Homeodomain 1.1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0184 - - gmx:100778007 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0184 07 2366306 2368590 Dod01g2813 01 68301484 68302721 PCT