Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0183 ATGGTTCTCAAGACCGAACTTTGCCGTTTTAGTGGGCAGAAGATTTACCCTGGGAAAGGGATCAGATTTATTCGCAGTGATTCTCAGGTCTTCCTGTTTGCCAACTCAAAATGCAAGAGGTACTTCCACAACAGATTGAAGCCATCGAAGCTTACCTGGACTGCCATGTATAGGAAGCAACACAAGAAGGACATTTCCCAAGAAGCTGTGAAGAAGAGGCGTCGTGCTACCAAAAGGCCTTACTCTAGGTCCATTGTTGGTGCTACTTTGGAAGTTATCCAGAAAAAAAGAACTGAGAAGCCTGAGGTTCGAGATGCTGCCAGAGAAGCTGCTCTTCGTGAAATCAAAGAGAGGATCAAGAAAACAAAGGATGAGAAGAAGGCAAAGAAGGCAGAAATGACCAAGGCCCAGAAAACACAAGGCAAAGGCAATGTTTCAAAGGGTGCTCAACCCAAAGGCCCTAAGCTTGGTGGTGGTGGTGGGAAGCGTTGA 492 0.4634 MVLKTELCRFSGQKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDISQEAVKKRRRATKRPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEMTKAQKTQGKGNVSKGAQPKGPKLGGGGGKR* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0183 163 SMART 4TRASH 8 46 IPR011017 -
Dod07g0183 163 ProSitePatterns Ribosomal protein L24e signature. 10 27 IPR023442 -
Dod07g0183 163 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 58 - -
Dod07g0183 163 Gene3D Ribosomal protein L24e 3 64 IPR038630 -
Dod07g0183 163 MobiDBLite consensus disorder prediction 115 163 - -
Dod07g0183 163 MobiDBLite consensus disorder prediction 115 136 - -
Dod07g0183 163 Gene3D - 69 141 - -
Dod07g0183 163 PANTHER 60S RIBOSOMAL PROTEIN L24 1 163 IPR000988 -
Dod07g0183 163 CDD Ribosomal_L24e_L24 3 56 IPR000988 -
Dod07g0183 163 Pfam Ribosomal protein L24e 4 67 IPR000988 -
Dod07g0183 163 PANTHER 60S RIBOSOMAL PROTEIN L24-RELATED 1 163 - -
Dod07g0183 163 Coils Coil 112 139 - -
Dod07g0183 163 MobiDBLite consensus disorder prediction 62 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0183 Dod-Chr7 2361534 2363816 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0183 1 156 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 85.350 7.25e-87 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0183 K02896 - twl:119999010 238.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0183 07 2361534 2363816 Dod07g0183 07 2361534 2363816 ECH
Dod01g2812 01 68298476 68300634 Dod07g0183 07 2361534 2363816 PCT