Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0181 ATGGGGGACAAGCAGGAAGAGGAGAGGACCGACAGCAGCGATTTCACGTCCGAGGACGAAGGGACCGAGGATTACCGCCGCGGCGGATACCACGCCGTCAGAATCGGCGACGGCTTCAAGAATGGAAGATACGTCGTTCAGAGCAAGCTCGGATGGGGTCACTTCTCCACTGTCTGGCTTGCTTGGGACACCCAATGCTCCAGATATGTGGCTCTGAAGGTTCAAAAGAGTGCTCAGCATTACACTGAGGCAGCCATGGATGAAATAACAATTTTGCAACAGATTGCGGAAGGAGACCCGGAGGATAAGAAGTGTGTGGTGAAGCTTTTGGACCATTTCAAGCATTCTGGTCCGAATGGACAGCATGTGTGCATGGTGTTTGAATACCTTGGGGATAACCTTTTAACTCTTATAAAGTATTCTGATTATCGTGGGATGCCTCTCAGCATGGTTAAAGAGATATGCTTTCATATTCTGGTTGGATTGGATTACTTACACAAGCAGCTTTCGATCATACATACTGACTTGAAACCTGAAAACATCCTCCTTTTATCTATGATAGATCCATCTAAGGATCCTAGAAAGTCTGGTACTCTGCTCATTCTTCCTAATACTAAAGATAAGACGGTATTGGAGTCGGGAGCTGCAAAAGACGTGAAGACATCAAATGGAGATTTGCTTAAGAATCATAAGAAAAAGATTAAAAGGAAAGCTAAGCAAGCAGCACATGGCTGTGTGGAGAAGGAAGCTTCTGAAGGAGTTGACGGTAATCCTGAAACCTCCAGTGCTGTAGAATCATCTCCTAATGCAAGTTCGGCAAGAGAACAAGCTTCCAGTTCTGCAGGCACTAATCGGTTATCAGATGCTGATGGAATGAAGTCAAAAGAACAGAGTGGCAAAAGAGGAAACCGTTCAATGAGACAGAAGCTGATTGCATCAGTTGATCTCAAGTGCAAATTAGTTGACTTTGGAAATGCTTGCTGGACATATAAACAGTTTACAAATGATATCCAAACAAGACAATATCGGTGCCCTGAGGTGATCCTTGGATCAAAATATTCCACATCTGCAGATCTATGGTCCTTTGCTTGCATTTGTTTCGAGCTTGCCACTGGAGACGTGCTATTTGATCCTCACAGTGGTGACAACTTCGATAGAGATGAGGACCACTTAGCGCTAATGATGGAACTTCTTGGAATGATGCCACGGAAGATTGCACTGGGGGGCCGCTATTCCCGTGATTTCTTCAATAGATATGGGGATTTGAGGCATATCAGGCGGTTGCGGTTCTGGCCCTTGAACAAGGTCCTCACGGAGAAGTATGATTTTAGCGAGCAAGATGCGAACGCCATGACTGAATTTCTGGTTCCGATCCTTGACTTTGTTCCCGAGAAACGGCCAACTGCCGGGCAGTGCCTTCAACATCCATGGATGAATGCAGGTCCACGCCTATTGGAGCCTTCCATGCCTTCTTCTAATCACAACCCAGCTGTGGACGCGGCCGCAGCCCGTGTCTGA 1518 0.4651 MGDKQEEERTDSSDFTSEDEGTEDYRRGGYHAVRIGDGFKNGRYVVQSKLGWGHFSTVWLAWDTQCSRYVALKVQKSAQHYTEAAMDEITILQQIAEGDPEDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYSDYRGMPLSMVKEICFHILVGLDYLHKQLSIIHTDLKPENILLLSMIDPSKDPRKSGTLLILPNTKDKTVLESGAAKDVKTSNGDLLKNHKKKIKRKAKQAAHGCVEKEASEGVDGNPETSSAVESSPNASSAREQASSSAGTNRLSDADGMKSKEQSGKRGNRSMRQKLIASVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTSADLWSFACICFELATGDVLFDPHSGDNFDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPLNKVLTEKYDFSEQDANAMTEFLVPILDFVPEKRPTAGQCLQHPWMNAGPRLLEPSMPSSNHNPAVDAAAARV* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0181 505 CDD STKc_SRPK 33 478 - -
Dod07g0181 505 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 488 - -
Dod07g0181 505 MobiDBLite consensus disorder prediction 240 254 - -
Dod07g0181 505 SMART serkin_6 44 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0181 505 ProSiteProfiles Protein kinase domain profile. 44 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0181 505 MobiDBLite consensus disorder prediction 221 306 - -
Dod07g0181 505 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
Dod07g0181 505 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Dod07g0181 505 MobiDBLite consensus disorder prediction 289 303 - -
Dod07g0181 505 PANTHER SERINE KINASE-LIKE PROTEIN 11 488 - -
Dod07g0181 505 Pfam Protein kinase domain 44 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0181 505 Pfam Protein kinase domain 315 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0181 505 MobiDBLite consensus disorder prediction 255 287 - -
Dod07g0181 505 Gene3D Phosphorylase Kinase; domain 1 20 126 - -
Dod07g0181 505 MobiDBLite consensus disorder prediction 486 505 - -
Dod07g0181 505 MobiDBLite consensus disorder prediction 1 24 - -
Dod07g0181 505 SUPERFAMILY Protein kinase-like (PK-like) 39 491 IPR011009 -
Dod07g0181 505 Gene3D Transferase(Phosphotransferase) domain 1 127 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0181 Dod-Chr7 2341162 2352229 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0181 1 496 EF-hand Containing Proteins AT5G22840 71.800 0.0 728
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Dod07g0181 Pkinase 2.6e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0181 K08832 - gmx:100810777 899.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0181 07 2341162 2352229 Dod07g0181 07 2341162 2352229 ECH