Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0167 ATGTCGGAACCCGCCGCCGAAACCGCCACTCCTCCGCCGGCGCCTCACAAGAGCTGGGCCGATGAAGCCGACGATGAAACTGCTGCCGCAGAAGAAACCACCGCAGCGGCGCCGCCACCGCCGTCGAGCTCCACCACCGAAGCAACCGCAACATCATCTCTCAACGTCGACAAATTATCGATCGACGAAACCAAAAAGCCTCCGAAGCTATTAGACGATCCCGACGACTCCAACATCCAAGCGGTTACCTCTGGAGACACGCCGTACACCTCTGCGGCGAAATTCGAGGACCTGAACCTGTCGCCGGAGCTGCTGAAGGGTCTCTATGTGGAGATGAAGTTCCAGAAGCCGAGCAAGATCCAAGCCATAAGCTTGCCGATGATCCTAAGCCCGCCGCATCGGGATTTGATCGCGCAGGCGCACAATGGTTCTGGCAAGACCACATGCTTTGTTCTAGGGATGCTTAGCCGGGTGGATCCTTCTATGCAGGCTCCTCAAGCTCTCTGCATTTGCCCAACCAGGGAGCTGGCTATTCAGAACACAGAAGTTCTCCGGAAGATGGGAAAGTACACTGGGATTAGCTCAGAGTGTGCTGTTCCAACAGACAGCAGGGACTCAATTCCAATAGCAAAAAGGGCGCCTATTATGGCTCAGGTGGTTATTGGAACCCCTGGCACGATAAAGAAGTGGATGACTTTCAAGAAATTGGGTGTGACCAGATTGAAGATTCTTGTCTTCGATGAGGCTGATCAAATGCTTGCTGAGGATGGTTTTAAAGATGATTCCTTGAGGATAATGAAAGAAATAGAAAAATTCAATTCTAGCTGTCAGGTTCTTCTGTTTTCTGCTACATTTAATGAAACTGTCAAGAACTTTGTTTCAAGGACAGTTAAGAAGGATCATAATAAACTTTTTGTGAAGAAAGAAGAACTTTCTTTAGATGCAGTGAAGCAATATAAAGTGCGTTGTCCTGATGAGCTGTCTAAGATTGAAGTGATAAAAGATTACATATTTGAAATAGGAGAGAACGTGGGCCAAACTATTATATTTGTGCGCACAAGAAATAGTGCAAAAATGCTGCATAAATCACTTGTTGATCTGGGTTATGAGGTTACTTCCATACAAGGTGCTCTTGATCATGAAGAGAGAGACAAGATTGTAAAGGAGTTCAGAGATGGTTTGACCCAAGTTCTTATATCAACTGATGTTCTTGCCCGAGGCTTCGATCAGCAACAGGTTAATTTGGTTATCAACTATGACCTTCCAGTGAAACATACTGCTGAGTATACCCGTGAATTTGAGCCGGATTATGAGGTGTATTTGCACAGGGTGGGTAGGGCTGGACGTTTCGGGCGCAAGGGGGCTGTGTTTAACCTGATATGTGATGAAAGGGATGAGAAGCTCATGTCAAAGATCGAGAACCATTTTGGCACCCATGTAACAGAGGTACGAGAAAAAAGTGTTGAAGACTATAAGGGTGCTCTCAAGGAGGCCGGTTTACTACAGTGA 1509 0.4698 MSEPAAETATPPPAPHKSWADEADDETAAAEETTAAAPPPPSSSTTEATATSSLNVDKLSIDETKKPPKLLDDPDDSNIQAVTSGDTPYTSAAKFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILSPPHRDLIAQAHNGSGKTTCFVLGMLSRVDPSMQAPQALCICPTRELAIQNTEVLRKMGKYTGISSECAVPTDSRDSIPIAKRAPIMAQVVIGTPGTIKKWMTFKKLGVTRLKILVFDEADQMLAEDGFKDDSLRIMKEIEKFNSSCQVLLFSATFNETVKNFVSRTVKKDHNKLFVKKEELSLDAVKQYKVRCPDELSKIEVIKDYIFEIGENVGQTIIFVRTRNSAKMLHKSLVDLGYEVTSIQGALDHEERDKIVKEFRDGLTQVLISTDVLARGFDQQQVNLVINYDLPVKHTAEYTREFEPDYEVYLHRVGRAGRFGRKGAVFNLICDERDEKLMSKIENHFGTHVTEVREKSVEDYKGALKEAGLLQ* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0167 502 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 332 492 IPR001650 -
Dod07g0167 502 PANTHER DEAD-BOX HELICASE DBP80 72 481 - -
Dod07g0167 502 SMART ultradead3 113 319 IPR014001 -
Dod07g0167 502 Gene3D - 313 495 IPR027417 -
Dod07g0167 502 MobiDBLite consensus disorder prediction 1 87 - -
Dod07g0167 502 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 127 303 IPR014001 -
Dod07g0167 502 CDD SF2_C_DEAD 316 460 - -
Dod07g0167 502 MobiDBLite consensus disorder prediction 59 73 - -
Dod07g0167 502 CDD DEADc_DDX19_DDX25 100 299 - -
Dod07g0167 502 Gene3D - 72 310 IPR027417 -
Dod07g0167 502 SMART helicmild6 358 451 IPR001650 -
Dod07g0167 502 Pfam Helicase conserved C-terminal domain 329 451 IPR001650 -
Dod07g0167 502 MobiDBLite consensus disorder prediction 37 58 - -
Dod07g0167 502 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 72 481 - -
Dod07g0167 502 Pfam DEAD/DEAH box helicase 119 291 IPR011545 GO:0003676|GO:0005524
Dod07g0167 502 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 93 122 IPR014014 GO:0003724
Dod07g0167 502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 469 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0167 Dod-Chr7 2204301 2209407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0167 59 483 Eukaryotic Initiation Factors Gene Family AT1G72730 35.484 2.74e-72 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0167 K18655 - gmx:100778091 742.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0167 07 2204301 2209407 Dod07g0167 07 2204301 2209407 ECH