Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0147 ATGGAAGAATCCACAACAACAACGGTCACGCTCGATTCCAAGAACAACAGCATCAGCATCAGCAGCTGTGAGTTGATGATGATGCAGAAGAAAGGTGAGGTGGTGAACGGTTACATTGTGTACGCGCGAAGGAGGACGAAGAAGAGGAATCGGAATCACCATTTCTCGGAGGAGATTGAGGAATCGAAGAAGAGGATCAAAGCATACGAAGCTGGTGGTGATGTTGTTGGAGTGAAGGTGGAGGAGAGTGACGTAGGTGGCGAAGGAGGTGAGGTGGTGGTGGAGGAGGTTGATGTGAGGAACGACGTCGTTTTCGGGGGGAGGGTGAAGAGGAATAGGAGGTTGACGTTTAAGTTTAAGGTGGCGCAGTGTGAAGGGGAAGAAGAGGAGAAGGCGGTGGTGGTGAAGACGAAGTCGGAGAAGGTGGTGCTGGTGAACAGGAGGCCGATGACAGTCAAGGAGCTCTTCGACACTGGCTTGCTCGATGGTGTTCCCGTTTTTTACGTGGGTGCCAAGAAGGATTCAACTTCAGGATTACGGGGTGTAATTCAAGATGGGGGAATATTGTGCTCATGCTGTATGTGCAATGGACGGAGGGTTATTCCACCTTCCCAATTCGAGATTCATGCTTGCAATACATATAAGAGAGCAGCACAGTATATTTGCCTTGACAATGGGAAGAGCCTGCTTGACCTATTGAGAGCATGCAGGGCAGTTCCTCTGCATAATTTGGAGGCGGCGGTTCAAAATTTTGTTTGTGCTCCACCTGAAGAAAAATACTTCACTTGCAGAAGTTGCAGAGGGTGTTTCCCATCTTCAAGTGTGGAAAGAGTGGGGCTCATATGCCATTCTTGCGCGGAATCAAGGAAATCTGAAGACGGTTCTATTCAAGTAGTTGGCAAAAGAATCAGGTTTCCTAAACCAGTTTTCCTTTCCGGTCCATCCAGTACTTCCGAAGTATGTGTCTCTTCACAAACTAAGAAACACTGGAAGAAAATAGCAAAGTCATCAAAACGGTCTAGGAGCTCAAATTTTTCCAAGGGTGCTTCAGATCCTATTCTATTTCACAAGAAAAGTTTGTGGAAGATGAAAACAAAGTCAACTAAACTGTCAGTAAAATTGAAGACTGTTCCAATTACTTCTAATCCAACGTGCTTGTCTCCAGAAAATAAGAGTGAGTGGAGGATCACTAAAAAGCATCAGCTATTGCATAAATTAATTTTTGAAGAAGATGGATTGCCTGATGGAGCTGAATTAGCTTATTATGCACGTGGACAGAAATTGCTCGAGGGTATCAAAAGGCGCTCTGGAATTGTGTGTGGATGCTGCAACACACTGGTCAGCCCTTCTCAGTTTGAGGTCCATGCAGGCTGGGCTTCTCGCAGGAAACCTTATACATACATCTATACGTCAAATGGGGTGTCTCTCCATGATTTAGCAATGTTTCTATTGAAAGATCGCAAATACACTGCAAAGTATAATAATGATCTATGCATAGTTTGTTGGGATGGTGGAAATCTGTTGCTCTGTGATGGATGCCCAAGGTCATTTCACAAAGAATGTGCATCTGTATCAAGTATTCCTCGTGGTGATTGGTTCTGTCAAATTTGCCAAAACATGTTCCAAAGAGAAAGGTTTGTGGCACACAATGCCAATGCTGTGGCAGCTGGACGGGTTGAAGGAGTTGATTCTATTGAACAGATTTCCGGAAGATGCATTCGCATAGTAAAAGATGTTGAAGCTGAGATTGGTGGTGGATGTGTTTTATGCGGAGGTTCTGACTTCAGCAGATCTGGATTTGGTCCTCGCACAATAATATTCTGTGATCAGTGTGAAAAGGAATACCATGTTGGCTGTTTGAGGGATCATAAGATGGCTTTTCTGAAGGAGTTGCCAGAAGGGAATTGGCTTTGTTGCAATGATTGCACAAGAATACATTCTATTTTGGATGACATCTTGGTTCGGGGGGATGAGAGACTCCCTGAATCTCTCTTGGATGTTATAAAGATGAAGCAAGAGGAAATATGTTTAGAACCACTCAATGAGATTGATGCAAGATGGAGAGTTCTTAATGGCAAAATTGCTTCGCCTGAAACCAGGCCATTGCTTTTGCAGGCTGTGTCAATGTTTCATGAATGCTTTGATCCTATAGTTGATCCAGCTAGTGGAAGTGACCTTATTCCTGCCATGGTTTATGGAAGGAGTGTGCAGACTCAGGATTTTGGAGGATTTTATTGTGCATTATTAATGGTCAAGTAA 2259 0.4413 MEESTTTTVTLDSKNNSISISSCELMMMQKKGEVVNGYIVYARRRTKKRNRNHHFSEEIEESKKRIKAYEAGGDVVGVKVEESDVGGEGGEVVVEEVDVRNDVVFGGRVKRNRRLTFKFKVAQCEGEEEEKAVVVKTKSEKVVLVNRRPMTVKELFDTGLLDGVPVFYVGAKKDSTSGLRGVIQDGGILCSCCMCNGRRVIPPSQFEIHACNTYKRAAQYICLDNGKSLLDLLRACRAVPLHNLEAAVQNFVCAPPEEKYFTCRSCRGCFPSSSVERVGLICHSCAESRKSEDGSIQVVGKRIRFPKPVFLSGPSSTSEVCVSSQTKKHWKKIAKSSKRSRSSNFSKGASDPILFHKKSLWKMKTKSTKLSVKLKTVPITSNPTCLSPENKSEWRITKKHQLLHKLIFEEDGLPDGAELAYYARGQKLLEGIKRRSGIVCGCCNTLVSPSQFEVHAGWASRRKPYTYIYTSNGVSLHDLAMFLLKDRKYTAKYNNDLCIVCWDGGNLLLCDGCPRSFHKECASVSSIPRGDWFCQICQNMFQRERFVAHNANAVAAGRVEGVDSIEQISGRCIRIVKDVEAEIGGGCVLCGGSDFSRSGFGPRTIIFCDQCEKEYHVGCLRDHKMAFLKELPEGNWLCCNDCTRIHSILDDILVRGDERLPESLLDVIKMKQEEICLEPLNEIDARWRVLNGKIASPETRPLLLQAVSMFHECFDPIVDPASGSDLIPAMVYGRSVQTQDFGGFYCALLMVK* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0147 752 SUPERFAMILY FYVE/PHD zinc finger 480 539 IPR011011 -
Dod07g0147 752 SUPERFAMILY FYVE/PHD zinc finger 587 640 IPR011011 -
Dod07g0147 752 ProSiteProfiles Zinc finger PHD-type profile. 495 540 IPR019787 -
Dod07g0147 752 Pfam Tify domain binding domain 181 236 IPR032308 -
Dod07g0147 752 Pfam Tify domain binding domain 434 481 IPR032308 -
Dod07g0147 752 ProSitePatterns Zinc finger PHD-type signature. 498 537 IPR019786 -
Dod07g0147 752 SMART PHD_3 497 538 IPR001965 -
Dod07g0147 752 SMART PHD_3 586 643 IPR001965 -
Dod07g0147 752 Pfam PHD-finger 498 539 IPR019787 -
Dod07g0147 752 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 484 574 IPR013083 -
Dod07g0147 752 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 18 751 - -
Dod07g0147 752 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 585 645 IPR013083 -
Dod07g0147 752 PANTHER AUTOIMMUNE REGULATOR 18 751 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0147 Dod-Chr7 2040117 2049938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0147 125 751 PHD Transcription Factor Family AT2G36720 50.078 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0147 - - ahf:112728915 1098.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2790 01 68012751 68020294 Dod07g0147 07 2040117 2049938 PCT