Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0126 ATGATGAATGTCCAAGAAGAACTTGTGGCCAACAAAGGCAAGCGCACCAAGCGTCCAAGGCCACCATCCCCACTTGGACCAATCGCCAATATGCTTTCACCAACTTCAAATTCCAGTGCAGGAACAAGCAACACTAACAATTCAGGAGAACTAATTGATGTGGCTACAACAAGAAGTACAACTACAACATCGGAATATGAATTGGAGGATGAAGACATGGCCTATTGTCTCATTCTATTGGCTCAAGGGCATCATCATCATCATCACACCCACAAAGCCTCACCATCAGCAAAACATGTGGCTGCATCTACACAGCATGATCACAATGATCATAACAATGGCCCTCACAAGTGCAAGACATGTAACAGATGCTTCCCTTCATTCCAAGCCCTTGGTGGACATAGAGCCAGCCACAAGAAACCCAATAACAAATCAAAGGGTGCTTATGTTATAGAAGAAAAACAAGAAGGAGTTACTAGTTTTGTGAGTGAATTAGATGGTGATCATGATCATCATTGTGACCCCAGCACAACAAGCACCATCCTCTCCTTGCAATTATCATCATCAAATAATAGGCTTAATTTGTATGGTACTAGCAGCACAAGAAGTAAACCAAGTGCTACTGCAAAGTCTAAATTACACGAGTGTTCTACATGTGGGGCTGAATTCTCATCAGGGCAAGCACTGGGGGGTCATATGAGAAGGCACAGAAATATTTTAAGCACATCTACAACAACAACATCTATGAGTGGTGGAGACATTAATATTATTGGTAGCACAGAATCCCAAGAAGCCAAGAAACCCAGAAATGTTTTGAAGCTAGACTTGAATCTTCCAGTAGCACCAGAGGGTCAATCAAAGTTTTCCTTTCAAACCAAGGAAAACGTTATTGTCTTCTCTGAACCTTCTTTGGTGGATTGCCATTACTCAATTTAG 936 0.4188 MMNVQEELVANKGKRTKRPRPPSPLGPIANMLSPTSNSSAGTSNTNNSGELIDVATTRSTTTTSEYELEDEDMAYCLILLAQGHHHHHHTHKASPSAKHVAASTQHDHNDHNNGPHKCKTCNRCFPSFQALGGHRASHKKPNNKSKGAYVIEEKQEGVTSFVSELDGDHDHHCDPSTTSTILSLQLSSSNNRLNLYGTSSTRSKPSATAKSKLHECSTCGAEFSSGQALGGHMRRHRNILSTSTTTTSMSGGDINIIGSTESQEAKKPRNVLKLDLNLPVAPEGQSKFSFQTKENVIVFSEPSLVDCHYSI* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0126 311 MobiDBLite consensus disorder prediction 29 63 - -
Dod07g0126 311 ProSitePatterns Zinc finger C2H2 type domain signature. 216 236 IPR013087 -
Dod07g0126 311 Pfam C2H2-type zinc finger 116 141 - -
Dod07g0126 311 Pfam C2H2-type zinc finger 214 237 - -
Dod07g0126 311 Gene3D Classic Zinc Finger 113 236 - -
Dod07g0126 311 ProSiteProfiles Zinc finger C2H2 type domain profile. 214 236 IPR013087 -
Dod07g0126 311 ProSitePatterns Zinc finger C2H2 type domain signature. 118 138 IPR013087 -
Dod07g0126 311 SUPERFAMILY beta-beta-alpha zinc fingers 115 236 IPR036236 -
Dod07g0126 311 MobiDBLite consensus disorder prediction 86 114 - -
Dod07g0126 311 PANTHER ZINC FINGER PROTEIN ZAT5 36 309 - -
Dod07g0126 311 ProSiteProfiles Zinc finger C2H2 type domain profile. 116 143 IPR013087 -
Dod07g0126 311 MobiDBLite consensus disorder prediction 1 64 - -
Dod07g0126 311 PANTHER GATA ZINC FINGER DOMAIN-CONTAINING PROTEIN 15-LIKE 36 309 - -
Dod07g0126 311 SMART c2h2final6 116 138 IPR013087 -
Dod07g0126 311 SMART c2h2final6 214 236 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0126 Dod-Chr7 1508882 1510134 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0126 12 309 C2H2 Transcription Factor Family AT5G03510 38.006 3.98e-48 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod07g0126 zf-C2H2_6 3.9e-12 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0126 - - mtr:MTR_1g062780 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0126 07 1508882 1510134 Dod06g1212 06 16222368 16223549 ECH
Dod07g0126 07 1508882 1510134 Dod07g0126 07 1508882 1510134 ECH
Dod07g0126 07 1508882 1510134 Dod10g1562 10 36322445 36323781 ECH
Dod07g0126 07 1508882 1510134 Dod03g2718 03 58818313 58818993 ECH
Dod01g2777 01 67634484 67635655 Dod07g0126 07 1508882 1510134 PCT