Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0123 ATGCAAGGGAAACATTTGCGCAAAGGGCCTTGGCAACAAGAGGAAGATGAGCAATTGACAAGTTTTGTTACCCGCCTTGGAGAAAGAAGGTGGGATTCTCTTGCCAAAGTAGCTGGCCTTAGGAGAAGTGGTAAAAGCTGCAGGTTAAGGTGGATGAACTATCTTCGTCCCAATCTCAAGCATGGCCCTTTTAGTATTGAAGAAGAGCAGATTGTTGTTCAGCTTCAACAGCAAATGGGCAACAAGTGGTCAAAGATTGCTCACCGGCTTCCAGGAAGAACGGACAATGAAATCAAGAACTATTGGAGAACTCATTTAAGTAAAAAAGCACAAATTCAACAAGAAGGTAGCATCAAGTATGAAATAGAGAACTCTGCTGATGATTATAGTCACAAAAGCAATGATGATATGGCTTCCAAGGATTGCAACCATGTGAGCCTTTGTTGTCAAGAAAACATGTGGGAGAGTAAGGGAAGTTCCATAGATACCTTTCCTTCATCAGATTGGGAATTGACAAGCTCACCATATGAAACTAGGATATTAGATTGGATAGCAGAATTGCAAAATGAATGTGGTGAGAAAGAACTAGAGCAGGATTGTAATAGCACAGGAACATATGACTATGATCCTGAAGGGTTTGCAGAAGGTTGTCATACATGGGATTATCCAGATTCCTTGTGGAACTTGGATTAA 693 0.4113 MQGKHLRKGPWQQEEDEQLTSFVTRLGERRWDSLAKVAGLRRSGKSCRLRWMNYLRPNLKHGPFSIEEEQIVVQLQQQMGNKWSKIAHRLPGRTDNEIKNYWRTHLSKKAQIQQEGSIKYEIENSADDYSHKSNDDMASKDCNHVSLCCQENMWESKGSSIDTFPSSDWELTSSPYETRILDWIAELQNECGEKELEQDCNSTGTYDYDPEGFAEGCHTWDYPDSLWNLD* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0123 230 Gene3D - 62 139 - -
Dod07g0123 230 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Dod07g0123 230 Pfam Myb-like DNA-binding domain 62 106 IPR001005 -
Dod07g0123 230 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Dod07g0123 230 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Dod07g0123 230 CDD SANT 63 106 IPR001005 -
Dod07g0123 230 SUPERFAMILY Homeodomain-like 6 102 IPR009057 -
Dod07g0123 230 CDD SANT 10 55 IPR001005 -
Dod07g0123 230 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 55 IPR017930 -
Dod07g0123 230 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 3 230 - -
Dod07g0123 230 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Dod07g0123 230 SMART sant 60 108 IPR001005 -
Dod07g0123 230 SMART sant 7 57 IPR001005 -
Dod07g0123 230 Gene3D - 8 60 - -
Dod07g0123 230 PANTHER MYB TRANSCRIPTION FACTOR 3 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0123 Dod-Chr7 1480844 1482173 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0123 7 111 MYB Transcription Factor Family AT5G59780 63.810 1.36e-45 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod07g0123 Myb_DNA-binding 2.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0123 K09422 - gmx:100783472 343.199