Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0109 ATGCAAGAATGTGCTAAAGTTCTGCCCAACGTTGAGATCATTCAGGGGTATGGCATGACTGAAGCATGTGGAATTATTTCCCTAGAAGATGCAGAGGAAGGGTGCCGGCTTTCAGGTTCAACGGGAGCACTACTACCAACTATAGAAGCCCGAATAGTTAGTTTGGAAACATCGAAGCCCCTTCCACCAAATCAAGCAGGGGAAATCTGTCTAAGAGGACCTACTATGATGCAAGGTTACTATAATAATCCAGAAGCGACAAAACTGACCATTGATGATCAAGGTTGGATGCATACGGGAGATCTTGGATACTTTGATGAACAGGGACAGCTATTTGTTGTAGATCGAATTAAGGAGCTCATCAAGTGCAATGGCTATCAGGTGGCGCCAGCAGAACTTGAAGACTTGCTAATTTCTCACCCTGAAATTTCAGATGCTGGGGTTATCCCATCCCCTGATGCTAAAGCTGGCGAGGTTCCAGTTGCTTTTGTAGTTCGCTCGCCTAACAGCTCCTTATCGGAAGAAGAAATTCAGAAGTTTGTAGCAGAACAGGCTGCACCATACAAAAGGTTGCGAAGAGTGACTTTTATAGAGAGGATTCCAAAGTCACCAGCAGGAAAGATCTTAAGAAAAGATCTCATGAGTTTTGA 650 0.4431 MQECAKVLPNVEIIQGYGMTEACGIISLEDAEEGCRLSGSTGALLPTIEARIVSLETSKPLPPNQAGEICLRGPTMMQGYYNNPEATKLTIDDQGWMHTGDLGYFDEQGQLFVVDRIKELIKCNGYQVAPAELEDLLISHPEISDAGVIPSPDAKAGEVPVAFVVRSPNSSLSEEEIQKFVAEQAAPYKRLRRVTFIERIPKSPAGKILRKDLMSF 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0109 216 SUPERFAMILY Acetyl-CoA synthetase-like 4 214 - -
Dod07g0109 216 Pfam AMP-binding enzyme 2 123 IPR000873 -
Dod07g0109 216 Gene3D - 119 216 IPR045851 -
Dod07g0109 216 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 1 214 - -
Dod07g0109 216 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 214 - -
Dod07g0109 216 Gene3D - 1 118 IPR042099 -
Dod07g0109 216 Pfam AMP-binding enzyme C-terminal domain 132 207 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0109 Dod-Chr7 1363775 1370040 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0109 1 214 Monolignol Biosynthesis Gene Families AT4G05160 67.757 6.74e-106 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0109 K01904 - rcu:8284003 335.109