Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0086 ATGATCTCCTATGTTGTCCAGCCTTCTGACAACATATCATCAATTGCTTCAAGGTTTGGATCTCAGGCACAGGCCATTATTGATGTGAATGGAAATAATTTAACTGATTATGACACCATCTTTGTCCCGGTGACTCAGTTGCCGGTTCTGTCGCAGCCTGCTGTTGCTCCTTCTCCGCCTCCTGCAGCCTCAAGCTCTGATGACAGGACGGGCACTGTGAGAGGGTTGGCCATTGGGTTGGGGATTGCTGGGCTGTTATTGATTTTGGTGACTGGTTTGTGGGTTTACAGGGAGGTTCTGTTCAAGGATAGGGTGGGGATGCTGAGGGATGAGGAGCATCAGAAGCAGCAGAACTTGTATTTGGGAGGGAAAGATGGCAAAGGGGGCAAGCAGATGGATGTGAAGTTGATGGCTAATGTTTCAGATTGCTTAGACAAGTACAGAGTCTTTGGTATTGAGGAACTGATAGAAGCCACCAATGGGTTTGATGAAAATTGCCTGATTCAAGGGTCTGTGTACAAGGGCCTTATTGATGGGGAGGTCTATGCAATCAAGAAGATGAAGTGGAATGCCTATGAGGAGCTCAAGATCTTGCAGAAGGTGAACCATGGGAATCTGGTGAGGTTGGAGGGGTTTTGCGTAGACTCGGAAGAAGCAAATTGCTATCTAGTGTATGAGTTCGTGGAGAATGGATCACTGTACTCATGGCTGCATGAGGAGCGCAATGAGAAGCCGAACTGGAAAACAAGGCTGAGAATAGCGATTGACATTGCGAATGGTCTGCAATACATCCATGAGCACACGAGGCCACGAGTGGTGCACAAAGACATCAAGAGCAGCAACGTTCTGCTGGACTCCAACATGAGAGCCAAGATTGCCAACTTTGGGCTTGCCAAGTCAGGCATGAATGCCATCACAATGCACATTGTCGGAACACAGGGCTACATTGCTCCCGAGTATCTGGCTGATGGTGTGGTCTCAACCAAGATGGACGTGTTCTCTTTCGGGGTTGTGTTGCTTGAGCTGATTTCTGGCAAGGAAGCCATTGATGATGAGGGAAACCTCTTGTGGGCCAGTGCTCTCAGAACTTTTGAAGTGAACAACGAGCAGGAGAAGGTTAGGAGGGCGAGAGAATGGTTGGATAATGCTATTTCGAGGGACACATTCTCAGTGGACAGTATGATGGGTGTGCTGTCCATTGCGATTGCTTGCTTGCATAAGGAACCATCAAAGAGGCCCAGCATAGTTGATATTGTGTATGCACTGTGTAAAAGTGAGGATACGGGCTTTGAGGTCTCTGATGAAGGGATTGGGTCCCCAAGGGTCGTGGCTAGGTGA 1338 0.4843 MISYVVQPSDNISSIASRFGSQAQAIIDVNGNNLTDYDTIFVPVTQLPVLSQPAVAPSPPPAASSSDDRTGTVRGLAIGLGIAGLLLILVTGLWVYREVLFKDRVGMLRDEEHQKQQNLYLGGKDGKGGKQMDVKLMANVSDCLDKYRVFGIEELIEATNGFDENCLIQGSVYKGLIDGEVYAIKKMKWNAYEELKILQKVNHGNLVRLEGFCVDSEEANCYLVYEFVENGSLYSWLHEERNEKPNWKTRLRIAIDIANGLQYIHEHTRPRVVHKDIKSSNVLLDSNMRAKIANFGLAKSGMNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDDEGNLLWASALRTFEVNNEQEKVRRAREWLDNAISRDTFSVDSMMGVLSIAIACLHKEPSKRPSIVDIVYALCKSEDTGFEVSDEGIGSPRVVAR* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0086 445 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 1 443 - -
Dod07g0086 445 Gene3D Transferase(Phosphotransferase) domain 1 228 435 - -
Dod07g0086 445 ProSiteProfiles LysM domain profile. 2 49 IPR018392 -
Dod07g0086 445 Gene3D Phosphorylase Kinase; domain 1 132 227 - -
Dod07g0086 445 ProSiteProfiles Protein kinase domain profile. 144 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0086 445 CDD LysM 2 42 IPR018392 -
Dod07g0086 445 Pfam Protein kinase domain 170 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0086 445 SUPERFAMILY Protein kinase-like (PK-like) 147 422 IPR011009 -
Dod07g0086 445 SMART serkin_6 162 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0086 445 Gene3D LysM domain 1 46 IPR036779 -
Dod07g0086 445 Pfam LysM domain 4 42 IPR018392 -
Dod07g0086 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Dod07g0086 445 PANTHER - 1 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0086 Dod-Chr7 901355 903843 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0086 1 422 Receptor kinase-like Gene Family AT3G21630 37.220 1.97e-63 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Dod07g0086 Pkinase 5.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0086 - - lang:109352405 691.804