Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod07g0080 | ATGTCTGTCTCTATTCTGGTGAATTGGTTCGGCTTATTAGCTCTTCCCAACTTCAATTGCGATATCAACTGGAACTTTCTGCAATCTTATTTTGCTAATCATATTCAAATAAAGAAAATGTCATCACTGGGCACTTCCAAGGGGATTCTCGAGATTGCCAAGTTTGGGGTGTATATAACTGTCCCCATCGTACTTATGTATACTTTCGCCAACAATACCAAGAACCTTCAGAAATTCATGGGAAATGTTGAGTGCAAAATTCAGCAGAGACATTATACCATGGTTGGATTGGAACTCATACCCATAGGTACAATTTTGGTTGTTCTAACCAACCAGGTCTTGACAACAGCTTCTGCAGCGCATGATGTTCTTATTGGTAAAGAAAGTTTCAAGGTCCTTTCAAAACACCTGCTTGATATTGCGCCAGTCCTAAAGGAATTACAACTTCAGGAGTTGAACGAGTCTCAAGCTGCAAGGGTTGCTCTAGAGTCTCTTGAAGCAGATGTCAACAGACTACAGAATGAGATGCAAAGGGTGGAGTTTGAGGCTTCAGAATCTCAGCTTCAAATTGTTGACAAACTGAACCATGGAATTAGAGAGCAGAAAAGGGATCAAGCTTTTGCAAATGACATTCTTGAGGAAATAGCAAGGGCAGTTAGGGTACCAGTGGAGCCCTCAGAGATAAGCAAAGAGCTTGACAGCATTAGGTGGGAAAAAGAAGAAGCTGCCAACAGGAAAGAAAGAGCTGAATTTATTTTCTTGGAGCAGATCATCGAGCTACTCTCTAGAGCTGATGCTGCAAGGGATTATGAAGAAGTTAAGAAGCAATACTTTGAAAGGGTTCAGGTAATAGAGCGATATGATTCAAGGGAAAAACATATCCCGCCGCTTAATTCTTTCCTATGTTGCATACTAGAGTTGTTATGGACTGACCCAGAAACGAAAGAGGTTCTTGAAGATACTACCTTGAGGTCAAACATCCCACTGAGACAATCCATAGAAGAGTGGAGAGAACTGAATTACTGCTTTATAATAAGGTCTATCAAGGAAAACTTGTTATCCAATTCTGACTTAGTTTCGCCAGAATACCTGTGCCGAATTCAGGCCCTCATAGGAGAGAATTCTATAAACAAGGATTGGGTTTCTATTGGAGGGCTTACTGATATTCTTATCTCCATCCTTGGGAACTCTCATTCCAGAGAAGTGAAAACGAATATTTTGATTACTTTGAAAGGACGCCGTAGAGGGGCATGCAAGAAACAAGATGAGGAAAACATTTCTAGAGCAGCTAAGTTTGGCTGGTACAAACCGCTTGTTGATCACTTGATTCAAGGATCGGAGTCTTCAAGAATGTTAATGGCCAAAGTAATAATTAATTTGGAGTCGAAAGAACTAAACTTGAAACACCTTGGGAAGCAAGGAGTTATACCTCCTTTGCTAGAAATGTTGTCAGGAAGCATTGAATCAAAAGAGGTATCATTATCAGCCCTGGTTAAACTAACAGGATGCCAGGCCAATAAGGGGATTATCGCTGCAAATGGTGGTGTGCCTCTTGTTCTAGATTTAATGTTCTCTCGCAGGATGCGGTCACTCATTACTATTAAATGCTGTGAAATCCTTGAGAAGCTTTCTTCTGATGATGATGGAATTGATTTCTTTGTTGATGGAGAACAGAAACTTCTTGAGTTAGATGACATCATTGTCAATCTGCTAGAGCTACAACGGATTCCTAACTCAGCTCACAACTTCCGCAAGGCCGCGTTGCGTGCCCTTCTTGGCATTTGCAGGTTTGAGAGTGGTTTAGTTAACAAGGCAGTCCTTGCAGCCAATGGTGTATCACTAATCCTTCCCCTTCTTGATGATGCTGACTCAGAAATCAGGGAGACTGCAATAAATCTTCTCTTTCCTTTCTCTCAACACGAACCAGAAGGAGTAGTTGAGTACCTCTTAAGGCCTAGAAGGCTGGAAGCTTTAGTTGGAGAACTCACAATGAAGTTGATTGACTTGGATGGCCTTGATGCAATCATAACCATTCTGAAGAATGGCACAATGGAAGCAAAAGAAAACGCTCTCAGTGCACTCTTCAGGTTCACAGATCCCACAAATGTCGAGTCGCAGCGTGATTTGGTAAAACGAGGAATATATCCTTTTCTTGAAAGTTTCCTCAGCACTGGCTCAGTGACAGCAAAGGCCAGAGCAGCAGCATTCATTGGTGATCTTTCTATGAGCACTCCAAAGCTCACATTTGTCTCCAAACCAACTGGCTGCCGGCGGTGCTTTAGATCATCACGAGTTCCTTTGTGTACAGCACATGGAAGTGTATGCAGTGTGGCTTCCACATTTTGTCTGTTGGAAGCAAATGCTTTGCCAGGCTTGATAGAGCTGTTACATGGGGAGGTTCATGCAATTGCTTATGAAGCAATACAGACACTTTCCACATTGGTTTTGGAAGACTTTCTTCAAAGGGGAGCCCGAGTGTTGCATCAGTCAAATGCAATGAGGCCCTTGTTGGAGATATTAAATTGGGGAACTGATTCTCTAAAGGCAGAAGCTCTAGGATTGTTGGAGAAGGTGTTTGTCTCAAAGGAAATGGTAGAATACTATGGAACAACAGCCAGAATGCGTCTGGTTGGTCTGACTGGCAACGTGGGGATGGCCACCTAA | 2664 | 0.4238 | MSVSILVNWFGLLALPNFNCDINWNFLQSYFANHIQIKKMSSLGTSKGILEIAKFGVYITVPIVLMYTFANNTKNLQKFMGNVECKIQQRHYTMVGLELIPIGTILVVLTNQVLTTASAAHDVLIGKESFKVLSKHLLDIAPVLKELQLQELNESQAARVALESLEADVNRLQNEMQRVEFEASESQLQIVDKLNHGIREQKRDQAFANDILEEIARAVRVPVEPSEISKELDSIRWEKEEAANRKERAEFIFLEQIIELLSRADAARDYEEVKKQYFERVQVIERYDSREKHIPPLNSFLCCILELLWTDPETKEVLEDTTLRSNIPLRQSIEEWRELNYCFIIRSIKENLLSNSDLVSPEYLCRIQALIGENSINKDWVSIGGLTDILISILGNSHSREVKTNILITLKGRRRGACKKQDEENISRAAKFGWYKPLVDHLIQGSESSRMLMAKVIINLESKELNLKHLGKQGVIPPLLEMLSGSIESKEVSLSALVKLTGCQANKGIIAANGGVPLVLDLMFSRRMRSLITIKCCEILEKLSSDDDGIDFFVDGEQKLLELDDIIVNLLELQRIPNSAHNFRKAALRALLGICRFESGLVNKAVLAANGVSLILPLLDDADSEIRETAINLLFPFSQHEPEGVVEYLLRPRRLEALVGELTMKLIDLDGLDAIITILKNGTMEAKENALSALFRFTDPTNVESQRDLVKRGIYPFLESFLSTGSVTAKARAAAFIGDLSMSTPKLTFVSKPTGCRRCFRSSRVPLCTAHGSVCSVASTFCLLEANALPGLIELLHGEVHAIAYEAIQTLSTLVLEDFLQRGARVLHQSNAMRPLLEILNWGTDSLKAEALGLLEKVFVSKEMVEYYGTTARMRLVGLTGNVGMAT* | 888 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod07g0080 | 887 | PANTHER | RING-TYPE E3 UBIQUITIN TRANSFERASE | 310 | 418 | - | - | |
Dod07g0080 | 887 | PANTHER | RING-TYPE E3 UBIQUITIN TRANSFERASE | 420 | 662 | - | - | |
Dod07g0080 | 887 | PANTHER | RING-TYPE E3 UBIQUITIN TRANSFERASE | 99 | 171 | - | - | |
Dod07g0080 | 887 | PANTHER | RING-TYPE E3 UBIQUITIN TRANSFERASE | 420 | 662 | - | - | |
Dod07g0080 | 887 | PANTHER | RING-TYPE E3 UBIQUITIN TRANSFERASE | 661 | 881 | - | - | |
Dod07g0080 | 887 | PANTHER | RING-TYPE E3 UBIQUITIN TRANSFERASE | 168 | 305 | - | - | |
Dod07g0080 | 887 | SUPERFAMILY | ARM repeat | 197 | 859 | IPR016024 | - | |
Dod07g0080 | 887 | SMART | arm_5 | 599 | 639 | IPR000225 | GO:0005515 | |
Dod07g0080 | 887 | SMART | arm_5 | 820 | 860 | IPR000225 | GO:0005515 | |
Dod07g0080 | 887 | SMART | arm_5 | 503 | 545 | IPR000225 | GO:0005515 | |
Dod07g0080 | 887 | SMART | arm_5 | 659 | 699 | IPR000225 | GO:0005515 | |
Dod07g0080 | 887 | SMART | arm_5 | 776 | 816 | IPR000225 | GO:0005515 | |
Dod07g0080 | 887 | SMART | arm_5 | 462 | 502 | IPR000225 | GO:0005515 | |
Dod07g0080 | 887 | Gene3D | - | 556 | 750 | IPR011989 | - | |
Dod07g0080 | 887 | Gene3D | - | 762 | 875 | IPR011989 | - | |
Dod07g0080 | 887 | PANTHER | RING-TYPE E3 UBIQUITIN TRANSFERASE | 310 | 418 | - | - | |
Dod07g0080 | 887 | PANTHER | RING-TYPE E3 UBIQUITIN TRANSFERASE | 99 | 171 | - | - | |
Dod07g0080 | 887 | Coils | Coil | 155 | 189 | - | - | |
Dod07g0080 | 887 | Gene3D | - | 241 | 555 | IPR011989 | - | |
Dod07g0080 | 887 | PANTHER | RING-TYPE E3 UBIQUITIN TRANSFERASE | 661 | 881 | - | - | |
Dod07g0080 | 887 | PANTHER | RING-TYPE E3 UBIQUITIN TRANSFERASE | 168 | 305 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod07g0080 | Dod-Chr7 | 829629 | 845381 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod07g0080 | 383 | 874 | U-box Gene Family | AT1G76390 | 22.898 | 1.74e-15 | 79.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod07g0080 | - | - | csin:114298668 | 782.326 |