Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0070 ATGAGTAATTTGCGAGATTCCTCGGCCTTTCTAAACAAGGCAAGACATAGGTGGAGATTGGCCTATAATGCTATTTTTTCTTTCAGAATCTTCTTGTCTGTTTTAACTCGGGTGGTGATCAAGAAGAACACCATCAACACAGCCAACAAGAGGTGGCGAGTGGCCTTTGCTGCTATCTACTCCTTTAGAGCTATAGCCTCTCTTTACGATGGAGTTGTTGCCAAAAAATATCACAATCCATCATTTATTGCCATCCATGTTGAACCAGACTTATTCTTTTCAAATGTTAACATGACATGCATAACCAAGCTGGTGAAGGACAGAGATCATGACACACTACTTCAACTTGGAGGGATAGATGGTCTTGTGATGTCACTTCAAACAGATGAAAGTAAAGGGATCAATGGAAGCCCCCAAGACATTTCTCGTCGACAGAAAGCATTTGGTTGCAACACTTATCACAAGCTAACAACAAAGAGCTTCTTCCACTTCGTGCTAATAGCAATGAAGGACCCAATACTTATCATCTTATTGGTATGTGCCACCCTTACCCTTGGTTATAACATTAAGGAAAATGGACTCAAACATGGATGGTATGATGGTGGGAGCATACTCATTGCCGTTCTTGTGGTTGTGACTGTTTGTTCAACAAGTCACTTCTGGCCCTATAGACAATTTAGCAAGCTGTTACAAATGAGTAGGGAAAATCATATTGAAGTTGTAAGAAATGGCCAGCAGCAGCAGGTTTTGGTATCTGACATTGTTGTGGGAGATGTTGTGTGCTTAAGGAGTGGAAATCAAGTTCCAGCAGATGGGTTTCTGTTGAGCTCCCATTCATCACTACTTGTGGATGAATCAAGCTTGGGAGCAGACAATCACCATGTAGAGGTTAGTAAAGTCCACAATCCATTCTTGTTTTCTGGAACTACGGTTGATTATGGGCATGGTCAGATGCTAGTAACATCTGTTGGTGAAAACACTAGATGGGGTGAGATAATGAGCCTTCTAGGCCATGAACCTCACAAATGGAGATCTCTAGAAACCCGACTTACAGCACTGACCAGTATCATGGGTATACTTGGAGCAATAGTGGCAGTGTCAACGTTGATTGTTCTGTTTGTTCGGTTTTTTTATGGTTATATGAAAAGTAATGATGGTTCAATAATGTTTAGAGCCGGCAAGATCAAATATGATGATGCTTGGCGAGCAGTAGTTGGAATTTTAGTCAGCACAGTGGCTGTTGCAACCTCAGCAATCCCTGAAGGGTAG 1269 0.4177 MSNLRDSSAFLNKARHRWRLAYNAIFSFRIFLSVLTRVVIKKNTINTANKRWRVAFAAIYSFRAIASLYDGVVAKKYHNPSFIAIHVEPDLFFSNVNMTCITKLVKDRDHDTLLQLGGIDGLVMSLQTDESKGINGSPQDISRRQKAFGCNTYHKLTTKSFFHFVLIAMKDPILIILLVCATLTLGYNIKENGLKHGWYDGGSILIAVLVVVTVCSTSHFWPYRQFSKLLQMSRENHIEVVRNGQQQQVLVSDIVVGDVVCLRSGNQVPADGFLLSSHSSLLVDESSLGADNHHVEVSKVHNPFLFSGTTVDYGHGQMLVTSVGENTRWGEIMSLLGHEPHKWRSLETRLTALTSIMGILGAIVAVSTLIVLFVRFFYGYMKSNDGSIMFRAGKIKYDDAWRAVVGILVSTVAVATSAIPEG* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0070 422 Gene3D - 167 422 - -
Dod07g0070 422 Pfam E1-E2 ATPase 235 422 - -
Dod07g0070 422 SUPERFAMILY Calcium ATPase, transduction domain A 237 335 IPR008250 -
Dod07g0070 422 Gene3D - 137 337 - -
Dod07g0070 422 Pfam Cation transporter/ATPase, N-terminus 117 183 IPR004014 -
Dod07g0070 422 PANTHER CATION TRANSPORTING ATPASE 43 422 - -
Dod07g0070 422 SUPERFAMILY Calcium ATPase, transmembrane domain M 117 422 IPR023298 -
Dod07g0070 422 PANTHER CALCIUM-TRANSPORTING ATPASE 43 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0070 Dod-Chr7 720962 722230 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0070 44 422 Primary Pumps ATPases AT3G22910 42.448 1.16e-80 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0070 K01537 - rcu:8280212 352.058