Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0069 ATGAAGAGAATGGTAAAGAATCGATCCTTATTCAGACAGTTCTCAACTTGTGTCCAACTTGCCTCAACATCTGTTATATGTGTTGACACAAATCTGGTGCTAACACTCGTGAAACAAAAGAACGTCAAACTTTGGTTAGGTGAAGAATTCATGGAAGGAGGTTCATCATCACAGTTGATAGCATCAAATGTCAGACACGTGCTCTGCCGGGGGATTAGTTTAAGCACATCCCAACTTTCAGGTGAGTTCTCACACAATTCAGTTGAAGAAGCCATCATTTGTTGGGCTACCACAGAGTTGGGAATGGACGCCCGAGAGTTAAGGCAAGGTTTCAGTGTTCTCCTTGTTGAAACACAGGTTGAAGAAATGAAGCACAGCAAAATTGTAGTGAGGAATGAAGTTGACCACACAGTTCATGTGCATGTGAATGGAAAAGCTGAGGGGATACTTCCTGAGTGTTCACATTATTATGGAGTTGAAGGGATTGTCAAAGCCATAGATAGTAACACAAGGAGGAGAGTGGAACAAACAATCCAAGTGATGGAACAAGAAGGATTCAAATGCATAGCATTTGCACATAAAGTACTCCAAAACGAAAATCACGACATTTGGGAGTCCTCTCAGTGGCTAGAAGATGGCTCATTAATCTTATTAGCATTGATAGGTTTCAAGCATCCTATTCAACCTGGGGTACCAAAGGCGGTAGAAGATTGCAAACAAGCAGGAGTGAACATCAAACTAATTACAAGTGAAGATGTTTTAACTGCAACAGCTATAGCTTCTGAATGTGGCATCCTTCATCAAAATGAAGAAATCAACAATGGAGAAGTGGTGGAAGGGTTCGAATTTCGAAACTACACAGAAACAGAAAGAATAGAGAAAGTTGATCAAATCTGTGTGATGGCAAAAGCCACTTGCTCTGACAAGCTCCTTTTAGTACAATGCTTGAAGCAAAAAGGCCATGTGGTTACAGTTACAGGACACAGCAATGGTGATGCTCCGGCTCTGAAAGAAGCTGATGTTGCCATTCATATGGGATTCCAGGGTAACAGCATAGCCGTAGAGAACTCCGACATAATAGTCCTTAATGAGGGTTTTGTGTCTGTGTTTGCAGTCATACAGGTTTGGAGAGGAATTTATGATAACATCAAAGTGCTCCTTCAGTTCTTGCTGGCAGCAAATTTAGCCTCCTTGGTGACAGACTTTGTTTCCACAGTTTCTGCTGACCATCCACCCACAATTGATATTTTGGCAGGTATCTCTGTTAAAGAAATCCCATATGCAGTACTACAGATATTGTGGGTGAAGCTTGTAATTGGTACTTTAGCTGTTCTTGCCTTAGTAGTAGAGCAAAACATCAAGGAGTTCATGCAAGAGAAGCCTGTAAGGCCTGACCAACCACTCATCAGCAACAGCATCTGCAGAAACATATTGATCCATGCCTCTTATGAGATAGCCATCCTCCTAACTTTGCAATTCAAAGGTGACACACTCTTGGGGATCAATGGCGATGTGAAGGACACACTGGTCTTCAATCTTTTGGTTTTGTTCCAAGTCTTTGCTGTTCTGAAAGCAAGGAAGCCCGATGGAAATATCTTTAAAGGAACAAAGAGGAGAAAATTGTTTTGGGGGATTGTGTTTGGCATTGTGATCCTTCAGGTGGTGATATTGGAGATTCTGGCAAAGGTGACAGGAACAGGAACTTTGAACGTGTGGCAATGGTTTGCATCTGTTGGCATTGCCCTCACATCTTGGCCAATACAGTACTTAGGTAGCAAGCTCATCCCTGTCCCTGAAATGCCCTTCATGTGTAGGGCCCTCTGA 1824 0.4243 MKRMVKNRSLFRQFSTCVQLASTSVICVDTNLVLTLVKQKNVKLWLGEEFMEGGSSSQLIASNVRHVLCRGISLSTSQLSGEFSHNSVEEAIICWATTELGMDARELRQGFSVLLVETQVEEMKHSKIVVRNEVDHTVHVHVNGKAEGILPECSHYYGVEGIVKAIDSNTRRRVEQTIQVMEQEGFKCIAFAHKVLQNENHDIWESSQWLEDGSLILLALIGFKHPIQPGVPKAVEDCKQAGVNIKLITSEDVLTATAIASECGILHQNEEINNGEVVEGFEFRNYTETERIEKVDQICVMAKATCSDKLLLVQCLKQKGHVVTVTGHSNGDAPALKEADVAIHMGFQGNSIAVENSDIIVLNEGFVSVFAVIQVWRGIYDNIKVLLQFLLAANLASLVTDFVSTVSADHPPTIDILAGISVKEIPYAVLQILWVKLVIGTLAVLALVVEQNIKEFMQEKPVRPDQPLISNSICRNILIHASYEIAILLTLQFKGDTLLGINGDVKDTLVFNLLVLFQVFAVLKARKPDGNIFKGTKRRKLFWGIVFGIVILQVVILEILAKVTGTGTLNVWQWFASVGIALTSWPIQYLGSKLIPVPEMPFMCRAL* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0069 607 SUPERFAMILY HAD-like 214 374 IPR036412 -
Dod07g0069 607 Pfam Cation transporting ATPase, C-terminus 426 589 IPR006068 -
Dod07g0069 607 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 66 231 IPR023299 GO:0000166
Dod07g0069 607 PRINTS H+-transporting ATPase (proton pump) signature 326 342 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod07g0069 607 PRINTS H+-transporting ATPase (proton pump) signature 358 383 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod07g0069 607 PRINTS H+-transporting ATPase (proton pump) signature 174 192 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod07g0069 607 SUPERFAMILY Calcium ATPase, transmembrane domain M 376 590 IPR023298 -
Dod07g0069 607 Gene3D - 125 226 IPR023299 GO:0000166
Dod07g0069 607 Gene3D - 372 583 - -
Dod07g0069 607 Pfam haloacid dehalogenase-like hydrolase 216 340 - -
Dod07g0069 607 Gene3D - 227 371 IPR023214 -
Dod07g0069 607 PANTHER CATION TRANSPORTING ATPASE 1 588 - -
Dod07g0069 607 PRINTS P-type cation-transporting ATPase superfamily signature 350 362 - -
Dod07g0069 607 PRINTS P-type cation-transporting ATPase superfamily signature 326 345 - -
Dod07g0069 607 PRINTS P-type cation-transporting ATPase superfamily signature 241 251 - -
Dod07g0069 607 PANTHER CALCIUM-TRANSPORTING ATPASE 1 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0069 Dod-Chr7 719105 720928 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0069 1 603 Primary Pumps ATPases AT3G63380 43.627 2.01e-171 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0069 K01537 - vvi:100259585 522.702