Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0067 ATGAGGCTTCCTGCATATGATGGCAGAAAAAGTCTGTACACAGCAGGGGCGCTTCCTTTTTCCTGTAGAGAGTTTAAGATTAAGCTTGTTGATGAAGAGGATGGAGTTAATGGCCCCAAAAGGGAAAGAGAATACAGAGTGGTTATTAAGTTTGTTGCTCAGGCAAACTTGCATCACTTAGTGCAATTTCTTGCTGGTAAGCGTGCTGATGCTCCACAGGAGGCACTCCAAATTCTCGACATTGTACTACGAGAGTTATCATCTAAGAGGTTTTGCCCCATTGGGAGGTCCTTCTTTTCACCTGATATTAGAACACCACAACGTCTTGGCGACGGGTTAGAATCATGGTGTGGATTTTACCAAAGCATTAGGCCTACTCAGATGGGCCTTTCCCTCAATATTGATATGGCTTCTGCTGCATTTATTGAACCTCTTCCAGTAGTGGAGTATGTGGGGCAGCTGCTAGGAAAGGATGTGCTGTCAAGGCAATTGTCTGATGCTGATCGCATTAAGACCATTCAGCATAATGCTTATGACCAAGATCCTTACGCGAAAGAATTTGGGATTAAAATAAGTGAAAAGCTAGCTTCTGTTGAAGCACGAATTCTTCCTGCCCCATGGCTTAAATATCATGAAAGTGGGAAAGAAAAGAATTGTTTACCCCATGTTGGTCAGTGGAATATGATGAACAAGAAAATGATTAATGGGATGACTGTTAGCCGGTGGGCATGCATAAATTTTTCATGGAGTGCGCAAGACAGTGTTGCCCGTACTTTCTGCAGTGAGCTTGCTCAAATGTGTCAAGTATCTGGCATGGAGTTTAATCCTGAGCCTGTTATCCCCATATATAATGCCAAGCCTGAGCAGGTGGTGAAAGCTTTGAAGCATGTTTACCATGTGTCAACAAACAAAACAAAAGGAAAGGAATTGGAGCTTTTGTTAGCAATATTGCCCGACAACAATGGCTCTCTCTATGGTGATCTCAAGCGTATTTGTGAAACCGAGCTTGGTTTAATTTCTCAATGTTGTCTGGCAAAGCATGTCTTTAAGATCACTAAGCAGTACTTGGCTAACGTGTCTCTGAAGATCAACGTAAAGATGGGAGGTAGAAACACCGTTCTTGTTGATGCTGTAAGCTGCAGAATACCATTGGTTAGTGACATACCAACTATAATATTCGGAGCAGATGTTACTCATCCTGAAAATGGGGAAGACTCTAGCCCCTCGATAGCAGCTGTAGTAGCTTCCCAGGACTGGCCTGAAGTGACAAAATATGCAGGTTTGGTGTGCGCTCAAGCTCATAGACAAGAACTTATACAAGATTTATACAAAACTTGGCATGATCCTGTTCGTGGAACAGTTAGTGGTGGCATGATCCGAGATTTGTTGGTTTCCTTTAGAAAGGCCACAGGACAGAAGCCGCTAAGGATTATATTTTACAGGGATGGTGTAAGTGAAGGGCAGTTTTACCAAGTTCTACTTTATGAGTTGGATGCAATCCGGAAGGCATGTGCTTCTTTAGAACCAAACTATCAACCTCCAGTAACTTTCATAGTCGTACAAAAAAGACATCATACTCGATTGTTCGCAAATAACCACAGGGACAGGAACAGTACAAACAAGAGTGGAAATATATTGCCTGGGACTGTAGTTGATTCAAAAATATGTCATCCAACAGAATTTGATTTTTATCTCTGCAGTCATGCTGGCATTCAGGGAACAAGTCGCCCAGCTCACTATCATGTCCTATGGGATGAAAACAATTTTACAGCCGATGGAATGCAGTCCTTGACAAACAATCTCTGTTATACATACGCCAGGTGTACACGATCTGTATCTGTTGTTCCTCCAGCATATTATGCACATTTAGCAGCCTTTCGAGCACGATTTTATATGGAACCAGACCTGCAGGAGAATGGCTCCACAGGTGGCGGTCATGGTTCCAAGGCGACGCGACCTGACGGAGATTGTGGTGTCAAGCCATTGCCAGCTCTGAAAGAGAATGTGAAGAGAGTAATGTTCTATTGTTAG 2031 0.4303 MRLPAYDGRKSLYTAGALPFSCREFKIKLVDEEDGVNGPKREREYRVVIKFVAQANLHHLVQFLAGKRADAPQEALQILDIVLRELSSKRFCPIGRSFFSPDIRTPQRLGDGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVEYVGQLLGKDVLSRQLSDADRIKTIQHNAYDQDPYAKEFGIKISEKLASVEARILPAPWLKYHESGKEKNCLPHVGQWNMMNKKMINGMTVSRWACINFSWSAQDSVARTFCSELAQMCQVSGMEFNPEPVIPIYNAKPEQVVKALKHVYHVSTNKTKGKELELLLAILPDNNGSLYGDLKRICETELGLISQCCLAKHVFKITKQYLANVSLKINVKMGGRNTVLVDAVSCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGTVSGGMIRDLLVSFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDRNSTNKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGMQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDLQENGSTGGGHGSKATRPDGDCGVKPLPALKENVKRVMFYC* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0067 676 Pfam N-terminal domain of argonaute 3 83 IPR032474 -
Dod07g0067 676 SUPERFAMILY Ribonuclease H-like 304 634 IPR012337 -
Dod07g0067 676 Pfam Piwi domain 313 632 IPR003165 GO:0003676
Dod07g0067 676 SMART DUF1785_2 92 144 IPR014811 -
Dod07g0067 676 PANTHER PROTEIN ARGONAUTE 10 1 172 - -
Dod07g0067 676 PANTHER PROTEIN ARGONAUTE 10 179 675 - -
Dod07g0067 676 Pfam Argonaute linker 1 domain 93 142 IPR014811 -
Dod07g0067 676 Gene3D - 202 375 - -
Dod07g0067 676 SUPERFAMILY PAZ domain 63 154 IPR036085 GO:0005515
Dod07g0067 676 CDD Piwi_ago-like 182 632 IPR045246 -
Dod07g0067 676 SMART Piwi_a_2 312 633 IPR003165 GO:0003676
Dod07g0067 676 ProSiteProfiles Piwi domain profile. 312 633 IPR003165 GO:0003676
Dod07g0067 676 Gene3D - 381 676 IPR036397 GO:0003676
Dod07g0067 676 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 1 172 - -
Dod07g0067 676 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 179 675 - -
Dod07g0067 676 MobiDBLite consensus disorder prediction 637 657 - -
Dod07g0067 676 Pfam Argonaute linker 2 domain 169 210 IPR032472 -
Dod07g0067 676 Pfam Mid domain of argonaute 221 298 IPR032473 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0067 Dod-Chr7 697445 706024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0067 166 676 Eukaryotic Initiation Factors Gene Family AT5G43810 89.258 0.0 978