Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0053 ATGGGAAGGAAGGGAAATTGGTTTTCTACTGTGAAGAAAGCTCTCAGCCCTGATTCAAAGGAAAGAAAAGACCAGAAATCGAGTAAATTAAAGAAGAAATGGTTTGGGAAGCAAAAGCTGCGGACTTCAGACTCTTGCTTGGAAGCTGATAAAGCCCCACCTCTTTCTCCTCCTGAAGAGATTGTAATCACTCATGTTGAAAATGAAAACAGCCATCATCATGCGGTGGAAGTTGCAACCGTTGTGGATGCTGAGGTACCCGCTCCTGCTGTTCAGACAACAATTGCTGAGGTTCAAGCCACTTCAATTGTTAAATTTGCCACTAAACCAAAGGATGATGTGGCAGCAATAAAAATTCAAACAGCTTTTCGGGGATACTTGGCAAGAAGAGCATTGCGGACTTCAAGGGGGCTGGTCAGGTTGAAATCTCTAATGGAAGGGCCAGTTGTAAAGCGCCAAGCCACTAGTACCATCCGTGCTATGCACACTTTAGGTCACGTGCAATCTCAGATTCGCTCTAGGAGGCTAAGGATGTTAGAGGAGAATCAGGCTCTGCAGAAACAGCTCTTACAGAAGCACGCAAAAGAGCTAGAGAGCATGCGGATTGGGGAGGAATGGGATGACAGCCTACAATCAAAAGAAGACATTGAAGCCAAGTTGCTAAGCAAGTATGAGGCTACTATGAGAAGAGAAAGAGCAATGGCTTATTCATTCTCCCATCAGCAAAGCTGGAAGAATTCATCAAGACCTATAAATCCAATGTTCATTGATCCAGCTAATCCTAACTGGGGTTGGAGCTGGTTGGAACGATGGATGGCAGCACATCCCTGGGAGAGCCATGGCCAGATAGAGAAAGAGAGGAACGACAATTCATCTGCGAAGAGTTCTCGCATGATTACCAGCGCAGAAATTAGCAAATCATTTGCGCGTTTCCATCTCAACTCTGAAAAGCATTCTCCAACAGCCAGCCAAAATCCAGGCACGCCTAACTCTCAGTCTAATCCGAATCCTCCCAAACCGCCTTCTCCAGCAGTTGCCAAGAAACTAAAGAAGGCTAGCCCAAAAGGCAGCTTTGCTATGGATGATGACACCAAAAGCATGGCCAGTGTGCAGTCAAGCCGGATCCGGAGGCACTCCATTGATGGATCAATAGTGAGAGATGATGAAAGCCTTGCAAGCTCTCCATCGGTACCAAGTTACATGGTGCCAACTAAATCTGCCAAAGCTAAGTCCAGGGTGGTGCAAAGTCCATTGGCCACAATAGAGAATGGCACCCGTGAGGGAGGGTCCTTTGGGACTGCAAAGAAACAACTCAATTTCCAAGCTTCACCCGCCAGACCAAGGAGGCATTCAGGTCCACCAAAGGTTGAAACCAGCTTCAATGCAGAAGTCACTGTGGGCAATGGTGTGGCTGGTTGA 1419 0.47 MGRKGNWFSTVKKALSPDSKERKDQKSSKLKKKWFGKQKLRTSDSCLEADKAPPLSPPEEIVITHVENENSHHHAVEVATVVDAEVPAPAVQTTIAEVQATSIVKFATKPKDDVAAIKIQTAFRGYLARRALRTSRGLVRLKSLMEGPVVKRQATSTIRAMHTLGHVQSQIRSRRLRMLEENQALQKQLLQKHAKELESMRIGEEWDDSLQSKEDIEAKLLSKYEATMRRERAMAYSFSHQQSWKNSSRPINPMFIDPANPNWGWSWLERWMAAHPWESHGQIEKERNDNSSAKSSRMITSAEISKSFARFHLNSEKHSPTASQNPGTPNSQSNPNPPKPPSPAVAKKLKKASPKGSFAMDDDTKSMASVQSSRIRRHSIDGSIVRDDESLASSPSVPSYMVPTKSAKAKSRVVQSPLATIENGTREGGSFGTAKKQLNFQASPARPRRHSGPPKVETSFNAEVTVGNGVAG* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0053 472 MobiDBLite consensus disorder prediction 364 378 - -
Dod07g0053 472 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 467 - -
Dod07g0053 472 MobiDBLite consensus disorder prediction 315 330 - -
Dod07g0053 472 SMART iq_5 111 133 IPR000048 GO:0005515
Dod07g0053 472 MobiDBLite consensus disorder prediction 409 440 - -
Dod07g0053 472 PANTHER IQ-DOMAIN 5-RELATED 1 467 - -
Dod07g0053 472 Pfam IQ calmodulin-binding motif 115 133 IPR000048 GO:0005515
Dod07g0053 472 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Dod07g0053 472 MobiDBLite consensus disorder prediction 1 39 - -
Dod07g0053 472 MobiDBLite consensus disorder prediction 315 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0053 Dod-Chr7 562604 567644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0053 1 471 IQD Protein Family AT5G03040 49.585 6.74e-138 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0053 - - gmx:100799058 629.017