Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0048 ATGGCCGATGACTTCGAATTCGCCGACAAAGTCCCTCCTTCCTTCGATCGCGTGGGAGATGTGATTAAGGATTCCGGTTCCAAAGGGTTCAACCCAGGATTGATAGTTCTCCTGGTTGTTGGTGGGTTGCTGCTGATATTCCTCATTGGAAACTATGTACTTTACACATATGCTCAGAAGACCCTCCCTGCAAGAAAGAAGAAGCCAATCTCAAAGAAGAAGATGAAGAAGGAGAGGCTCAAGCAAGGCATCTCTGCACCTGGGGAGTAG 270 0.4815 MADDFEFADKVPPSFDRVGDVIKDSGSKGFNPGLIVLLVVGGLLLIFLIGNYVLYTYAQKTLPARKKKPISKKKMKKERLKQGISAPGE* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0048 89 MobiDBLite consensus disorder prediction 63 89 - -
Dod07g0048 89 PANTHER DNA-BINDING PROTEIN S1FA1-RELATED 3 89 - -
Dod07g0048 89 MobiDBLite consensus disorder prediction 65 79 - -
Dod07g0048 89 Pfam DNA binding protein S1FA 26 89 IPR006779 GO:0003677|GO:0005634|GO:0006355
Dod07g0048 89 PANTHER DNA-BINDING PROTEIN S1FA2 3 89 IPR006779 GO:0003677|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0048 Dod-Chr7 529345 531607 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Dod07g0048 S1FA 1.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0048 - - gmx:100499820 149.058