Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0046 ATGGACAAAAATCAAAATTTAGAATTCCAGCTCCCTCCTGGATTCAGATTCCACCCTTCTGATGAAGAGCTAATTGTTCACTATCTGAGAAACAAGGTGACTTCATGCCCCCTCCCTGCTTCATGCATAGCAGAAATAGACCTCTACAAATATAATCCATGGGAGCTCCCAAGCAAAGCTTTGTTTGGGGAGGATGAATGGTATTTCTTTACTCCTAGGGACAGGAAGTATCCTAATGGGATGAGGCCTAATAGAGCAGCTGGTTCAGGTTATTGGAAGGCCACAGGCACTGACAAACCCATCCTCACTTCTTGTGGGACAAAGAGTATTGGACTGAAGAAGGCCCTTGTGTTCTACAAGGGACGCCCCCCAAAGGGATATAAAACCGATTGGATCATGCATGAGTATCGGTTGCACGAGTCAATGAACTTACACACCAGGCAAATAGGGTCTATGAGACTGGATGAGTGGGTGCTTTGCCGGGTTCGACTGAAAACCAACAGCACAAGAAGCCCTTGGGAAGATTCAAATGAACATAGTAATGAACCAAGTACCAGTGACTTTCAGCAAGTGAATGGAAACTCCAATCAAGAGCTAGTAAAAAATTATGTGTACAATGAGTTTCCAATGTTACCCCATATTCTGGCTTCTAAGAGTACTATGCCCAATTCTATTAGTATGGCTTCAAGCGCAGGCTTTGGTTGCAATGATGGTATAAAAGCACATGCTTCAGTGCATGAAGACAAATTAAACTTACTAGGAGCACAGTTCCTAGCATCTTCTGCCGAGAGCTTGCGTAGTCCAATGAAGAGAAAATTTGTTGAAGAAAATCAACTGGACCATTATGCTGCTCCGAATAAAAAGCTAATCGAAGTAGAAGTATGA 885 0.4305 MDKNQNLEFQLPPGFRFHPSDEELIVHYLRNKVTSCPLPASCIAEIDLYKYNPWELPSKALFGEDEWYFFTPRDRKYPNGMRPNRAAGSGYWKATGTDKPILTSCGTKSIGLKKALVFYKGRPPKGYKTDWIMHEYRLHESMNLHTRQIGSMRLDEWVLCRVRLKTNSTRSPWEDSNEHSNEPSTSDFQQVNGNSNQELVKNYVYNEFPMLPHILASKSTMPNSISMASSAGFGCNDGIKAHASVHEDKLNLLGAQFLASSAESLRSPMKRKFVEENQLDHYAAPNKKLIEVEV* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0046 294 Gene3D NAC domain 20 170 IPR036093 GO:0003677|GO:0006355
Dod07g0046 294 Pfam No apical meristem (NAM) protein 12 138 IPR003441 GO:0003677|GO:0006355
Dod07g0046 294 ProSiteProfiles NAC domain profile. 11 165 IPR003441 GO:0003677|GO:0006355
Dod07g0046 294 SUPERFAMILY NAC domain 8 165 IPR036093 GO:0003677|GO:0006355
Dod07g0046 294 MobiDBLite consensus disorder prediction 169 192 - -
Dod07g0046 294 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 2 288 - -
Dod07g0046 294 PANTHER NAC TRANSCRIPTION FACTOR 56 2 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0046 Dod-Chr7 518988 520250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0046 11 170 NAC Transcription Factor Family AT1G69490 68.750 1.91e-82 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod07g0046 NAM 1.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0046 - - lja:Lj1g3v4579400.1 459.144