Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0034 ATGGAAGGAGGTTCATCATCACAGTTGATAGCATCAAATGTCAGACACGTGCTCTGCCGGGGGATTAGTTTAAGCACATCCCAACTTTCAGGTGAGTTCTCACACAATTCAGTTGAAGAAGCCATCATTTGTTGGGCTACCACAGAGTTGGGAATGGACGCCCAAGAGTTAAGGCAAGGTTTCAGTGTTCTCCTTGTTGAAACACAGGTTGAAGAAATGAAGCACAGCAAAATTGTAGTGAGGAATGAAGTTGACCACACAGTTCATGTGCATGTGAATGGAAAAGCTGAGGGGATACTTCCTGAGTGTTCACATTATTATGGAGTTGAAGGGATTGTCAAAGCCATAGATAGTAACACAAGGAGGAGAGTGGAGCAAACAATCCAAGTGATGGAACGAGAAGGATTCAAATGCATAGCATTTGCACATAAAGTACTCCAAAACGAAAATCACGACATTTGGGAGTCCTCTCAGTGGCTAGAAGATGACTCATTAATCTTATTAGCATTGATAGGTTTCAAGCCTCCTATTCAACCTGGGGTACCAAAGGCGGTAGAAGATTGCAAACAAGCAGGAGTGAACATCAAACTAATTACAAATGAAGATGTTTTAACTGCAACAACTATAGCTTCTGAATGTGGCATCCTTCATCAAAATGAAGAAATCAACAATGGAGAAGTGGTGGAAGCGTTCGAATTTCGAAACTACACAGAAACAGAAAGAATAGAGAAAGTTGATCAAATATGTGTGATGGCAAAAGCCACTTGCTCTGACAAGCTCCTTTTAGTACAATGCTTGAAGCAAAAAGGCCATGTGGTTACAGTTACAGGACACAGCAATGGTGATGCTCGGGCTCTGAAAGAAGCTGATGTTGCCATTCATATGGGATTCCAGGGTAACAGCATAGCCGTAGAGAACTCCGACATAATAGTCCTTAATGAGGGTTTTGTGTTTGTGTTTGCAGTCATACAGGTTTGGAGAGGAATTTATGATAACATCAAAGTGCTCCTTCAGTTCTTGCTGGCAGCAAATTTAGCCTCCTTGGTGACAGACTTTGTTTCCACAGTTTCTGCTGACCATCCACCCACAATTGATATTTTGGCAGGTATCTCTGTTAAAGAAATCCCATATGCAGTACTACAGATATTGTGGGTGAAGCTTATAATTGGTACTTTAGCTGTTCTTGCCTTAGTAGTGGAGCAAAACACCGAGGAGTTCATGCAAGAGAAGCCTGTAAGGCCTGACCAACCACTCATCAGCAACAGCATCTGCAGAAACATACTGATCCATGCCTCTTATGAGATAGCCATCCTCCTAACTTTGCAATTCAAAGGTGACACACTCTTGGGGATCAATGGCGATGTGAAGGACACACTGGTCTTCAATCTTTTGGTTTTGTTCCAAGTCTTTGCTGTTCTGAAAGCAAGGAAGCCCGATGGAAATATCTTTAAAGGAAAAAAGAGGAGAAAATTGTTTTGGGGGATTGTTTTTGGCATTGTGATCCTTCAGGTGGTGATATTGGAGATTCTGGCAAAGGTTACAGGAACAGGAACTTTGAACGTGTGGCAATGGGCTGCATCTGTTGGGATTGCCCTCACATCTTGGCCAATACAGTACTTAGGTAGCAAGCTCATCCCTGTCCCTGAAATGCCCTTCATGTGTAGGGCCCTCTGA 1674 0.4277 MEGGSSSQLIASNVRHVLCRGISLSTSQLSGEFSHNSVEEAIICWATTELGMDAQELRQGFSVLLVETQVEEMKHSKIVVRNEVDHTVHVHVNGKAEGILPECSHYYGVEGIVKAIDSNTRRRVEQTIQVMEREGFKCIAFAHKVLQNENHDIWESSQWLEDDSLILLALIGFKPPIQPGVPKAVEDCKQAGVNIKLITNEDVLTATTIASECGILHQNEEINNGEVVEAFEFRNYTETERIEKVDQICVMAKATCSDKLLLVQCLKQKGHVVTVTGHSNGDARALKEADVAIHMGFQGNSIAVENSDIIVLNEGFVFVFAVIQVWRGIYDNIKVLLQFLLAANLASLVTDFVSTVSADHPPTIDILAGISVKEIPYAVLQILWVKLIIGTLAVLALVVEQNTEEFMQEKPVRPDQPLISNSICRNILIHASYEIAILLTLQFKGDTLLGINGDVKDTLVFNLLVLFQVFAVLKARKPDGNIFKGKKRRKLFWGIVFGIVILQVVILEILAKVTGTGTLNVWQWAASVGIALTSWPIQYLGSKLIPVPEMPFMCRAL* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0034 557 PRINTS P-type cation-transporting ATPase superfamily signature 191 201 - -
Dod07g0034 557 PRINTS P-type cation-transporting ATPase superfamily signature 300 312 - -
Dod07g0034 557 PRINTS P-type cation-transporting ATPase superfamily signature 276 295 - -
Dod07g0034 557 SUPERFAMILY HAD-like 166 388 IPR036412 -
Dod07g0034 557 Pfam Cation transporting ATPase, C-terminus 376 539 IPR006068 -
Dod07g0034 557 Pfam haloacid dehalogenase-like hydrolase 166 290 - -
Dod07g0034 557 Gene3D - 75 176 IPR023299 GO:0000166
Dod07g0034 557 PRINTS H+-transporting ATPase (proton pump) signature 276 292 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod07g0034 557 PRINTS H+-transporting ATPase (proton pump) signature 124 142 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod07g0034 557 PRINTS H+-transporting ATPase (proton pump) signature 308 333 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod07g0034 557 Gene3D - 322 533 - -
Dod07g0034 557 Gene3D - 177 321 IPR023214 -
Dod07g0034 557 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 17 181 IPR023299 GO:0000166
Dod07g0034 557 PANTHER CALCIUM-TRANSPORTING ATPASE 8 538 - -
Dod07g0034 557 SUPERFAMILY Calcium ATPase, transmembrane domain M 327 540 IPR023298 -
Dod07g0034 557 PANTHER CATION TRANSPORTING ATPASE 8 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0034 Dod-Chr7 395310 396983 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0034 6 553 Primary Pumps ATPases AT3G63380 43.986 1.76e-155 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0034 K01537 - vvi:100259585 483.026