Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0029 ATGGAAGTACGCGACAGCCCAAAAATCTTCATTTATGTCTTCGACCCCCGAAACTTGGAGTGGACGAAATTGGAGGACAAGGTCATAGGCTCTTTCTGGGCAGCGAGCACACCACGCTGCGATTCTGACTCAGCCTCCTCTTCATCTCGAAATCCTTCGCGTAACACCCCAAAAGATAGGAGTCCTATGGCTGTTGAACACAAGTTACCAACAAGTCCATTACCTGATGAGGATGAAGTCTTGATCACTGGATTGGGACGAAAAGGTCATGTCATGGGTGATATTCCTGGTGTCAGGTTCGAGGTTGTGAAAGTTTCCTGTGTTTCTCTTCTGGCTCTCTTCATGGACAAGAAGGAGAAGCCAAGACGTATCCAGAGATTAGACACAATGGTTGGTGAGCATGGAACTCAATTACCTGGTGGACAAAAGCTGTGCATCGCCATTGCTAGGTCCCTAAATATCGAAGGATTCTACTACTTCTAG 483 0.47 MEVRDSPKIFIYVFDPRNLEWTKLEDKVIGSFWAASTPRCDSDSASSSSRNPSRNTPKDRSPMAVEHKLPTSPLPDEDEVLITGLGRKGHVMGDIPGVRFEVVKVSCVSLLALFMDKKEKPRRIQRLDTMVGEHGTQLPGGQKLCIAIARSLNIEGFYYF* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0029 160 MobiDBLite consensus disorder prediction 37 77 - -
Dod07g0029 160 Pfam Ribosomal protein S12/S23 74 122 IPR006032 GO:0003735|GO:0005840|GO:0006412
Dod07g0029 160 Gene3D - 125 152 IPR027417 -
Dod07g0029 160 Gene3D - 71 123 IPR012340 -
Dod07g0029 160 MobiDBLite consensus disorder prediction 37 58 - -
Dod07g0029 160 PANTHER 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER 76 122 IPR006032 GO:0003735|GO:0005840|GO:0006412
Dod07g0029 160 PANTHER BNACNNG03140D PROTEIN 76 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0029 Dod-Chr7 307776 310534 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0029 74 122 Cytoplasmic Ribosomal Protein Gene Family AT5G02960 75.510 6.11e-20 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0029 K02973 - sind:105161405 77.4109