Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0026 ATGTGGACATTTTGTACTACAATTCTTTATTTAGTTGATCTAAAGGTTTTGTTTCCTTTTTATCTCCATAACAGCATCACCATACTTTTCTTTGCAAAAGAAGGTGAAGGCTGCATCCTTACACCAATGAAGGAAAATATTCTTCCACCCGTGACTGTAAATTTTCAGCAAGGTCTTGGCCAGAAGTTTAGACAGCCAGCTGGAACTGGTATTGATTTTTCACTGTTTGAGGAGTCTGAGTTGTTGAAAGTGGGTGACATGAATGTCTATCCTCTAGCAGTTAAGGCTGATGCATCCTCCAGCGATCATGATGGATCGAATGAGACATCGACATCTCATGATGGATCAAATGAGACACCGACATCTCGTGATGGATTGAATGAGACCCTGGCATCTCGTGATGGATCAAATGAGACCCTGACATCTTGTGATGGATCAAATGAGACTCCAGCATCTCATGATGGATCAAATGAGACTACGACATCTGGTAACACAAACTCTCAGATAACTCAAGCAGTGTTTGAGAAGGAGAAAGGGGAATTCCGGGTGAAGGTTGTTAAGCAGATCTTGTGGGTGAAGGCAATGAGGTATGAGCTGCAGGAGATATATGGTATCGGAAATTCAGTCGAGAGTGACTTGGATGGTAATGACCCAGGAAAAGAGTGTGTTATCTGTCTGTCAGAGCCTAGGGACACAACTGTCCTTCCTTGCCGTCACATGTGCATGTGTAGCGAATGTGCAAAGGTTTTGAGGTTACAGACGAATAGATGTCCAATCTGCAGACAACCAGTTGAGAGGCTATTGGAAATCAAAGTCGGGCCTGAACCTGAGGAATGA 837 0.4337 MWTFCTTILYLVDLKVLFPFYLHNSITILFFAKEGEGCILTPMKENILPPVTVNFQQGLGQKFRQPAGTGIDFSLFEESELLKVGDMNVYPLAVKADASSSDHDGSNETSTSHDGSNETPTSRDGLNETLASRDGSNETLTSCDGSNETPASHDGSNETTTSGNTNSQITQAVFEKEKGEFRVKVVKQILWVKAMRYELQEIYGIGNSVESDLDGNDPGKECVICLSEPRDTTVLPCRHMCMCSECAKVLRLQTNRCPICRQPVERLLEIKVGPEPEE* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0026 278 CDD mRING-HC-C3HC5_MGRN1_like---blasttree 221 261 IPR045195 -
Dod07g0026 278 ProSiteProfiles Zinc finger RING-type profile. 222 261 IPR001841 -
Dod07g0026 278 PANTHER E3 UBIQUITIN-PROTEIN LIGASE 152 278 - -
Dod07g0026 278 PANTHER E3 UBIQUITIN-PROTEIN LIGASE 21 117 - -
Dod07g0026 278 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 206 271 IPR013083 -
Dod07g0026 278 SMART ring_2 222 260 IPR001841 -
Dod07g0026 278 MobiDBLite consensus disorder prediction 103 166 - -
Dod07g0026 278 Pfam Zinc finger, C3HC4 type (RING finger) 220 266 - -
Dod07g0026 278 PANTHER MAHOGUNIN 21 117 IPR045194 GO:0061630
Dod07g0026 278 MobiDBLite consensus disorder prediction 97 166 - -
Dod07g0026 278 PANTHER MAHOGUNIN 152 278 IPR045194 GO:0061630
Dod07g0026 278 SUPERFAMILY RING/U-box 221 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0026 Dod-Chr7 277125 282294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0026 26 241 C3H Transcription Factor Family AT3G09770 50.679 6.33e-64 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0026 - - aip:107626498 380.948