Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0025 ATGAAGAATCCTTGTTCCTTTTTTGCTTGTTTCTCATCAGCATCTCTCAATCAACAACACAACAACAACGACTTAGACGCAGAGGGAGAGATTATTAATATTGATGATGGAGTCTTTTGTGTGTTCACCTATAACCAATTAAAATCCGCCACTAGTGGTTTTCATTCCTCGAAGAAGGTTGGAGAAGGAGGATTCGCTTCTGTCTATAAGGGGAAGCTTGGGGATGGCACTTTTGTGGCAGTGAAGGTGCTTTCGATTGAGGTGGAATCCATGCGAGGAGAGGTTGAATTTGTGGCTGAATTAGCTTCACTCGCAAATATCAGCCACCAAAATCTAGTTAGCCTTCGAGGGTGTTGTGTGGAAGGAGCTCAGAGATATCTTGTCTACGATTACATGGACAACAATAGCCTTTATAACACTTTCTTAGGTTCAGAGGAGGGAAGGATGAGATTCAGCTGGGAAGCAAGGAGTGACGTGGCCATAGGTGTGGCTCGTGGCCTTGCCTTTCTCCATGAGGAGCTTAGGCCCCATATTGTGCATAGGGACATTAAAGCAAGCAATATACTTCTTGATAGCAATTTCACACCAAAAATTTCCGATTTTGGTTTGGCAAAGCTACTTAGAGATGAAACATCTTACATAAGTACCAGAGTGGCAGGAACATTGGGTTATCTTGCTCCAGAATATGCTCGTTCCGGCCGGGTGACGCGAAAATCAGATGTTTATAGCTTTGGAGTATTACTGATACAAATCATTAGTGGCCTAGCAGTTGTCGATGCCTATCAAGATGTTGATCGTTTCATCGTAGAGAAGGCTTGGGCAGCATATGAAGCCAACAATCTATTGAGAATGGTGGATCCTGTGCTTAACATGAGCTTTTCACCAGAAGAAGTCATTAGATTCTTGAAGGTGGGGTTGCTTTGCGTGCAAGAAACAGCCAAGCTTAGGCCAAGAATGTCAGAGGTTGTAGAGAAGTTGACCAACAATGTTGACATGAGTGACTCTCGCATTTCAAGACCTGGGTTTGTTGCTGATCTCAGGAACATCAGAATCAAGCAACAAAGGGACATGAACTCATCAGAGGAATCAAGTTATAGTGTACCAAACTTTGCAAGTCCAAGCTCCATTTGGAGTCGTTAA 1140 0.4333 MKNPCSFFACFSSASLNQQHNNNDLDAEGEIINIDDGVFCVFTYNQLKSATSGFHSSKKVGEGGFASVYKGKLGDGTFVAVKVLSIEVESMRGEVEFVAELASLANISHQNLVSLRGCCVEGAQRYLVYDYMDNNSLYNTFLGSEEGRMRFSWEARSDVAIGVARGLAFLHEELRPHIVHRDIKASNILLDSNFTPKISDFGLAKLLRDETSYISTRVAGTLGYLAPEYARSGRVTRKSDVYSFGVLLIQIISGLAVVDAYQDVDRFIVEKAWAAYEANNLLRMVDPVLNMSFSPEEVIRFLKVGLLCVQETAKLRPRMSEVVEKLTNNVDMSDSRISRPGFVADLRNIRIKQQRDMNSSEESSYSVPNFASPSSIWSR* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0025 379 SMART serkin_6 54 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0025 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
Dod07g0025 379 ProSiteProfiles Protein kinase domain profile. 54 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0025 379 Gene3D Transferase(Phosphotransferase) domain 1 132 339 - -
Dod07g0025 379 PANTHER RECEPTOR-LIKE KINASE 10 357 - -
Dod07g0025 379 Gene3D Phosphorylase Kinase; domain 1 14 131 - -
Dod07g0025 379 MobiDBLite consensus disorder prediction 358 379 - -
Dod07g0025 379 ProSitePatterns Protein kinases ATP-binding region signature. 60 82 IPR017441 GO:0005524
Dod07g0025 379 CDD STKc_IRAK 60 328 - -
Dod07g0025 379 MobiDBLite consensus disorder prediction 355 379 - -
Dod07g0025 379 Pfam Protein kinase domain 54 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0025 379 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 10 357 - -
Dod07g0025 379 SUPERFAMILY Protein kinase-like (PK-like) 38 326 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0025 Dod-Chr7 247028 250360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0025 42 367 Receptor kinase-like Gene Family AT1G53430 45.732 1.86e-91 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod07g0025 Pkinase 6.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0025 - - gmx:100813945 555.058